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04/05: gnu: kaiju: Fetch sources from git.


From: Ricardo Wurmus
Subject: 04/05: gnu: kaiju: Fetch sources from git.
Date: Wed, 7 Nov 2018 14:47:45 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 6fe323bf2ef7d3fd665ed4ed4f27498d67aa3655
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Nov 7 20:44:11 2018 +0100

    gnu: kaiju: Fetch sources from git.
    
    * gnu/packages/bioinformatics.scm (kaiju)[source]: Fetch from git.
    [arguments]: Remove redundant installation step.
---
 gnu/packages/bioinformatics.scm | 15 +++++++--------
 1 file changed, 7 insertions(+), 8 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4d2b29c..ce11066 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3828,14 +3828,14 @@ data.")
     (name "kaiju")
     (version "1.6.2")
     (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "https://github.com/bioinformatics-centre/kaiju/archive/v";
-                    version ".tar.gz"))
-              (file-name (string-append name "-" version ".tar.gz"))
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/bioinformatics-centre/kaiju";)
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
               (sha256
                (base32
-                "1kdn4rxs0kr9ibmrgrfcci71aa6j6gr71dbc8pff7731rpab6kj7"))))
+                "1c6gqir9djm3wpvfjm43i5vvvf36k3rsvr9fph76wlcy9aghpbah"))))
     (build-system gnu-build-system)
     (arguments
      `(#:tests? #f ; There are no tests.
@@ -3849,8 +3849,7 @@ data.")
              (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
                (mkdir-p bin)
                (chdir "..")
-               (copy-recursively "bin" bin)
-               (copy-recursively "util" bin))
+               (copy-recursively "bin" bin))
              #t)))))
     (inputs
      `(("perl" ,perl)



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