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15/22: gnu: vsearch: Update to 2.9.1.


From: Ricardo Wurmus
Subject: 15/22: gnu: vsearch: Update to 2.9.1.
Date: Thu, 8 Nov 2018 04:11:13 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 86c6928ea39aff622124030c20404ce94dae9b49
Author: Ricardo Wurmus <address@hidden>
Date:   Thu Nov 8 09:46:42 2018 +0100

    gnu: vsearch: Update to 2.9.1.
    
    * gnu/packages/bioinformatics.scm (vsearch): Update to 2.9.1.
    * gnu/packages/patches/vsearch-unbundle-cityhash.patch: Update.
---
 gnu/packages/bioinformatics.scm                      | 4 ++--
 gnu/packages/patches/vsearch-unbundle-cityhash.patch | 6 +++---
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9954fcf..d9362ea 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6825,7 +6825,7 @@ SELECT or UPDATE queries to an end-point.")
 (define-public vsearch
   (package
     (name "vsearch")
-    (version "2.8.0")
+    (version "2.9.1")
     (source
      (origin
        (method git-fetch)
@@ -6835,7 +6835,7 @@ SELECT or UPDATE queries to an end-point.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0lrw6n75gmqkxl053yi2pwwvnzwf1r79ypzxgv6m0kw6df5fwv6r"))
+         "0vhrpjfdf75ba04b24xknp41790cvcgwl0vgpy7qbzj5xh2521ss"))
        (patches (search-patches "vsearch-unbundle-cityhash.patch"))
        (snippet
         '(begin
diff --git a/gnu/packages/patches/vsearch-unbundle-cityhash.patch 
b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
index b1ecb1f..2a2ab13 100644
--- a/gnu/packages/patches/vsearch-unbundle-cityhash.patch
+++ b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
@@ -6,7 +6,7 @@ index e56a8a2..4adcc48 100644
  if TARGET_PPC
  AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -mcpu=power8
  else
--AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g
+-AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -march=x86-64 -mtune=generic
 +AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -lcityhash
  endif
  
@@ -39,7 +39,7 @@ index e56a8a2..4adcc48 100644
 -
  if TARGET_WIN
  
--libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g -D_MSC_VER
+-libcityhash_a_CXXFLAGS = $(AM_CXXFLAGS) -Wno-sign-compare -D_MSC_VER
 -__top_builddir__bin_vsearch_LDFLAGS = -static
 -__top_builddir__bin_vsearch_LDADD = libregex.a libcityhash.a libcpu_ssse3.a 
libcpu_sse2.a
 +__top_builddir__bin_vsearch_LDFLAGS = -static -lcityhash
@@ -47,7 +47,7 @@ index e56a8a2..4adcc48 100644
  
  else
  
--libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g
+-libcityhash_a_CXXFLAGS = $(AM_CXXFLAGS) -Wno-sign-compare
 -
  if TARGET_PPC
 -__top_builddir__bin_vsearch_LDADD = libcityhash.a libcpu.a



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