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19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.
From: |
guix-commits |
Subject: |
19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri. |
Date: |
Wed, 4 Dec 2019 03:46:46 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 1afdf41b4984dfe09807583a0ee38bdff3579fa2
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 4 09:33:54 2019 +0100
gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm
(r-txdb-mmusculus-ucsc-mm9-knowngene)[source]:
Use bioconductor-uri.
---
gnu/packages/bioconductor.scm | 8 ++------
1 file changed, 2 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ca4b57c..42a3f7b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -547,12 +547,8 @@ track. The database is exposed as a @code{TxDb} object.")
(version "3.2.2")
(source (origin
(method url-fetch)
- ;; We cannot use bioconductor-uri here because this tarball is
- ;; located under "data/annotation/" instead of "bioc/".
- (uri (string-append "https://bioconductor.org/packages/"
- "release/data/annotation/src/contrib"
- "/TxDb.Mmusculus.UCSC.mm9.knownGene_"
- version ".tar.gz"))
+ (uri (bioconductor-uri "TxDb.Mmusculus.UCSC.mm9.knownGene"
+ version 'annotation))
(sha256
(base32
"16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"))))
- branch master updated (19e67f8 -> e21b668), guix-commits, 2019/12/04
- 02/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri., guix-commits, 2019/12/04
- 10/29: gnu: r-org-ce-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 04/29: gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 11/29: gnu: r-org-dm-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 24/29: gnu: r-abadata: Use bioconductor-uri., guix-commits, 2019/12/04
- 19/29: gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.,
guix-commits <=
- 13/29: gnu: r-org-hs-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 12/29: gnu: r-org-dr-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 05/29: gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri., guix-commits, 2019/12/04
- 09/29: gnu: r-bsgenome-mmusculus-ucsc-mm10: Use bioconductor-uri., guix-commits, 2019/12/04
- 17/29: gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri., guix-commits, 2019/12/04
- 23/29: gnu: r-do-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 14/29: gnu: r-org-mm-eg-db: Use bioconductor-uri., guix-commits, 2019/12/04
- 08/29: gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri., guix-commits, 2019/12/04
- 07/29: gnu: r-bsgenome-mmusculus-ucsc-mm9: Use bioconductor-uri., guix-commits, 2019/12/04
- 27/29: gnu: r-all: Use bioconductor-uri., guix-commits, 2019/12/04