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45/47: gnu: Add r-acmeeqtl.
From: |
guix-commits |
Subject: |
45/47: gnu: Add r-acmeeqtl. |
Date: |
Fri, 13 Dec 2019 16:42:23 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 73f055df34b1d174544e0232b5aaf1d735f90d9e
Author: Ricardo Wurmus <address@hidden>
Date: Fri Dec 13 19:24:31 2019 +0100
gnu: Add r-acmeeqtl.
* gnu/packages/cran.scm (r-acmeeqtl): New variable.
---
gnu/packages/cran.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index ddbd8de..943a1b6 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -17186,3 +17186,28 @@ as with usual R matrices. It supports very large
matrices; the package has
been tested on multi-terabyte matrices. It allows for more than 2^32 rows or
columns, ad allows for quick addition of extra columns to a filematrix.")
(license license:lgpl3)))
+
+(define-public r-acmeeqtl
+ (package
+ (name "r-acmeeqtl")
+ (version "1.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "ACMEeqtl" version))
+ (sha256
+ (base32
+ "049xjv2ym35bbn43zwi68cq27fwdh404vp0r2ca5gxgmmx8kj1cz"))))
+ (properties `((upstream-name . "ACMEeqtl")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-filematrix" ,r-filematrix)))
+ (home-page "https://github.com/andreyshabalin/ACMEeqtl")
+ (synopsis "Estimation of interpretable eQTL effect sizes")
+ (description
+ "This package provides a non-linear model, termed ACME, that reflects a
+parsimonious biological model for allelic contributions of cis-acting eQTLs.
+With non-linear least-squares algorithm the maximum likelihood parameters can
+be estimated. The ACME model provides interpretable effect size estimates and
+p-values with well controlled Type-I error.")
+ (license license:lgpl3)))
- 13/47: gnu: Add r-abcrlda., (continued)
- 13/47: gnu: Add r-abcrlda., guix-commits, 2019/12/13
- 17/47: gnu: Add r-showtextdb., guix-commits, 2019/12/13
- 33/47: gnu: Add r-ace2fastq., guix-commits, 2019/12/13
- 30/47: gnu: Add r-elasticnet., guix-commits, 2019/12/13
- 18/47: gnu: Add r-showtext., guix-commits, 2019/12/13
- 21/47: gnu: Add r-abtest., guix-commits, 2019/12/13
- 32/47: gnu: Add r-accsda., guix-commits, 2019/12/13
- 35/47: gnu: Add r-randtoolbox., guix-commits, 2019/12/13
- 39/47: gnu: Add r-acfmperiod., guix-commits, 2019/12/13
- 44/47: gnu: Add r-filematrix., guix-commits, 2019/12/13
- 45/47: gnu: Add r-acmeeqtl.,
guix-commits <=
- 46/47: gnu: Add r-acmer., guix-commits, 2019/12/13
- 47/47: gnu: Add r-r-huge., guix-commits, 2019/12/13
- 15/47: gnu: Add r-rintrojs., guix-commits, 2019/12/13
- 16/47: gnu: Add r-sysfonts., guix-commits, 2019/12/13
- 12/47: gnu: Add r-abcdefba., guix-commits, 2019/12/13
- 28/47: gnu: Add r-accrued., guix-commits, 2019/12/13
- 34/47: gnu: Add r-rngwell., guix-commits, 2019/12/13
- 36/47: gnu: Add r-lhs., guix-commits, 2019/12/13
- 37/47: gnu: Add r-acebayes., guix-commits, 2019/12/13
- 23/47: gnu: Add r-accept., guix-commits, 2019/12/13