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01/323: import: cran: Update the Bioconductor version to 3.12.
From: |
guix-commits |
Subject: |
01/323: import: cran: Update the Bioconductor version to 3.12. |
Date: |
Mon, 7 Dec 2020 15:12:35 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit f301ced1f0b0caef0c7c5e8cb8283cb7f09229ca
Author: Roel Janssen <roel@gnu.org>
AuthorDate: Wed Nov 18 15:27:20 2020 +0100
import: cran: Update the Bioconductor version to 3.12.
* guix/import/cran.scm (%bioconductor-version): Set to 3.12.
* guix/build-system/r.scm (bioconductor-uri): Update to 3.12.
---
guix/build-system/r.scm | 2 +-
guix/import/cran.scm | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index 5ef982d..e2bf41f 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -59,7 +59,7 @@ release corresponding to NAME and VERSION."
"/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append "https://bioconductor.org/packages/3.11"
+ (string-append "https://bioconductor.org/packages/3.12"
type-url-part
"/src/contrib/"
name "_" version ".tar.gz"))))
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index d6baa6b..6c1fbd7 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -142,9 +142,9 @@ package definition."
(define %cran-url "https://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.11. Bioconductor packages should be
+;; The latest Bioconductor release is 3.12. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.11")
+(define %bioconductor-version "3.12")
(define* (bioconductor-packages-list-url #:optional type)
(string-append "https://bioconductor.org/packages/"
- branch wip-r created (now 74a8f79), guix-commits, 2020/12/07
- 01/323: import: cran: Update the Bioconductor version to 3.12.,
guix-commits <=
- 03/323: gnu: r-coverageview: Update to 1.28.0., guix-commits, 2020/12/07
- 04/323: gnu: r-cummerbund: Update to 2.32.0., guix-commits, 2020/12/07
- 06/323: gnu: r-biocgenerics: Update to 0.36.0., guix-commits, 2020/12/07
- 02/323: gnu: r-ideoviz: Update to 1.26.0., guix-commits, 2020/12/07
- 07/323: gnu: r-affycomp: Update to 1.66.0., guix-commits, 2020/12/07
- 09/323: gnu: r-affycontam: Update to 1.48.0., guix-commits, 2020/12/07
- 05/323: gnu: r-biocversion: Update to 3.12.0., guix-commits, 2020/12/07
- 12/323: gnu: r-annotate: Update to 1.68.0., guix-commits, 2020/12/07
- 15/323: gnu: r-reportingtools: Update to 2.30.0., guix-commits, 2020/12/07
- 08/323: gnu: r-affycompatible: Update to 1.50.0., guix-commits, 2020/12/07