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05/10: gnu: r-rbgl: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
05/10: gnu: r-rbgl: Move to (gnu packages bioconductor). |
Date: |
Fri, 12 Mar 2021 08:53:09 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit f44079bc2151979cde33704fec73f1da1726a2f5
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Mon Mar 8 18:57:58 2021 +0100
gnu: r-rbgl: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-rbgl): Move from here...
* gnu/packages/bioconductor.scm (r-rbgl): ...to here.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 23 -----------------------
2 files changed, 23 insertions(+), 23 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c698178..1c298d6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1650,6 +1650,29 @@ high-throughput sequencing experiments.")
the Human Protein Atlas project.")
(license license:artistic2.0)))
+(define-public r-rbgl
+ (package
+ (name "r-rbgl")
+ (version "1.66.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "RBGL" version))
+ (sha256
+ (base32
+ "016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"))))
+ (properties `((upstream-name . "RBGL")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-bh" ,r-bh)
+ ("r-graph" ,r-graph)))
+ (home-page "https://www.bioconductor.org/packages/RBGL")
+ (synopsis "Interface to the Boost graph library")
+ (description
+ "This package provides a fairly extensive and comprehensive interface to
+the graph algorithms contained in the Boost library.")
+ (license license:artistic2.0)))
+
(define-public r-regioner
(package
(name "r-regioner")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5751585..788f780 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7387,29 +7387,6 @@ includes software to
")
(license license:cc0))))
-(define-public r-rbgl
- (package
- (name "r-rbgl")
- (version "1.66.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "RBGL" version))
- (sha256
- (base32
- "016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"))))
- (properties `((upstream-name . "RBGL")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-graph" ,r-graph)))
- (home-page "https://www.bioconductor.org/packages/RBGL")
- (synopsis "Interface to the Boost graph library")
- (description
- "This package provides a fairly extensive and comprehensive interface to
-the graph algorithms contained in the Boost library.")
- (license license:artistic2.0)))
-
(define-public r-gseabase
(package
(name "r-gseabase")
- branch master updated (323aec6 -> df6b3c2), guix-commits, 2021/03/12
- 01/10: gnu: r-genefilter: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 02/10: gnu: r-deseq2: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 03/10: gnu: r-dexseq: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 04/10: gnu: r-annotationforge: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 05/10: gnu: r-rbgl: Move to (gnu packages bioconductor).,
guix-commits <=
- 07/10: gnu: r-category: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 06/10: gnu: r-gseabase: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 08/10: gnu: r-gostats: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 09/10: gnu: r-shortread: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 10/10: gnu: r-systempiper: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12