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37/54: gnu: r-seqlogo: Move to (gnu packages bioconductor).


From: guix-commits
Subject: 37/54: gnu: r-seqlogo: Move to (gnu packages bioconductor).
Date: Mon, 31 May 2021 10:03:16 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 0006a664155c7d556ac773b254fd09205412c172
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:26:09 2021 +0200

    gnu: r-seqlogo: Move to (gnu packages bioconductor).
    
    * gnu/packages/bioinformatics.scm (r-seqlogo): Move from here...
    * gnu/packages/bioconductor.scm (r-seqlogo): ...to here.
---
 gnu/packages/bioconductor.scm   | 23 +++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 23 -----------------------
 2 files changed, 23 insertions(+), 23 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c9f72c5..b53267e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3652,6 +3652,29 @@ differential expression analysis, RNAseq data and 
related problems.")
     ;; Any version of the LGPL
     (license license:lgpl3+)))
 
+(define-public r-seqlogo
+  (package
+    (name "r-seqlogo")
+    (version "1.56.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "seqLogo" version))
+       (sha256
+        (base32
+         "02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1"))))
+    (properties `((upstream-name . "seqLogo")))
+    (build-system r-build-system)
+    (native-inputs
+     `(("r-knitr" ,r-knitr)))
+    (home-page "https://bioconductor.org/packages/seqLogo";)
+    (synopsis "Sequence logos for DNA sequence alignments")
+    (description
+     "seqLogo takes the position weight matrix of a DNA sequence motif and
+plots the corresponding sequence logo as introduced by Schneider and
+Stephens (1990).")
+    (license license:lgpl2.0+)))
+
 (define-public r-seqpattern
   (package
     (name "r-seqpattern")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 8f011f0..832de0b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8023,29 +8023,6 @@ used to obtain robust estimates of the predominant 
fragment length or
 characteristic tag shift values in these assays.")
     (license license:bsd-3)))
 
-(define-public r-seqlogo
-  (package
-    (name "r-seqlogo")
-    (version "1.56.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "seqLogo" version))
-       (sha256
-        (base32
-         "02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1"))))
-    (properties `((upstream-name . "seqLogo")))
-    (build-system r-build-system)
-    (native-inputs
-     `(("r-knitr" ,r-knitr)))
-    (home-page "https://bioconductor.org/packages/seqLogo";)
-    (synopsis "Sequence logos for DNA sequence alignments")
-    (description
-     "seqLogo takes the position weight matrix of a DNA sequence motif and
-plots the corresponding sequence logo as introduced by Schneider and
-Stephens (1990).")
-    (license license:lgpl2.0+)))
-
 (define-public r-zlibbioc
   (package
     (name "r-zlibbioc")



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