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66/80: gnu: r-structuralvariantannotation: Update to 1.8.2.


From: guix-commits
Subject: 66/80: gnu: r-structuralvariantannotation: Update to 1.8.2.
Date: Tue, 24 Aug 2021 06:31:58 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 514454cc8f54cb9f129f72de0db4e9bbb799ad67
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Aug 24 00:33:18 2021 +0200

    gnu: r-structuralvariantannotation: Update to 1.8.2.
    
    * gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 
1.8.2.
    [propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
    r-summarizedexperiment.
---
 gnu/packages/bioconductor.scm | 8 ++++++--
 1 file changed, 6 insertions(+), 2 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c8e33cc..0d9df49 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4221,24 +4221,28 @@ graph construction.")
 (define-public r-structuralvariantannotation
   (package
     (name "r-structuralvariantannotation")
-    (version "1.8.1")
+    (version "1.8.2")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "StructuralVariantAnnotation" version))
        (sha256
-        (base32 "13q6zbdkpx1iw6n75pggg50f9q3zb7k3dxjdra8mhi6zin7018j8"))))
+        (base32 "04ac4mjh3pgdlws0aiacqg0vd7bhg890w44r7b90p947c3rk1mfw"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-assertthat" ,r-assertthat)
        ("r-biocgenerics" ,r-biocgenerics)
        ("r-biostrings" ,r-biostrings)
        ("r-dplyr" ,r-dplyr)
+       ("r-genomeinfodb" ,r-genomeinfodb)
        ("r-genomicfeatures" ,r-genomicfeatures)
        ("r-genomicranges" ,r-genomicranges)
+       ("r-iranges" ,r-iranges)
        ("r-rlang" ,r-rlang)
        ("r-rtracklayer" ,r-rtracklayer)
+       ("r-s4vectors" ,r-s4vectors)
        ("r-stringr" ,r-stringr)
+       ("r-summarizedexperiment" ,r-summarizedexperiment)
        ("r-variantannotation" ,r-variantannotation)))
     (native-inputs
      `(("r-knitr" ,r-knitr)))



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