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01/03: gnu: Add r-biocdockermanager.
From: |
guix-commits |
Subject: |
01/03: gnu: Add r-biocdockermanager. |
Date: |
Tue, 7 Sep 2021 06:21:54 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 2c8e3595e3d3a63dc4c0832025242d35c94b0100
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Sep 7 12:16:33 2021 +0200
gnu: Add r-biocdockermanager.
* gnu/packages/bioconductor.scm (r-biocdockermanager): New variable.
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c78e025..05b6aa1 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -40,6 +40,7 @@
#:use-module (gnu packages cran)
#:use-module (gnu packages compression)
#:use-module (gnu packages curl)
+ #:use-module (gnu packages docker)
#:use-module (gnu packages gcc)
#:use-module (gnu packages graph)
#:use-module (gnu packages graphviz)
@@ -14043,6 +14044,36 @@ automate the process of creating R packages for
Bioconductor or making them
Bioconductor-friendly.")
(license license:artistic2.0)))
+(define-public r-biocdockermanager
+ (package
+ (name "r-biocdockermanager")
+ (version "1.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BiocDockerManager" version))
+ (sha256
+ (base32
+ "0dh1flm5chsdcihljrg6znjskqkp0qyjh39hsv4zq0frf1rm97j7"))))
+ (properties
+ `((upstream-name . "BiocDockerManager")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("docker" ,docker)
+ ("r-dplyr" ,r-dplyr)
+ ("r-httr" ,r-httr)
+ ("r-memoise" ,r-memoise)
+ ("r-readr" ,r-readr)
+ ("r-whisker" ,r-whisker)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/BiocDockerManager")
+ (synopsis "Access and manage Bioconductor Docker images")
+ (description
+ "This package works analogous to BiocManager but for Docker images. Use
+the BiocDockerManager package to install and manage Docker images provided by
+the Bioconductor project.")
+ (license license:artistic2.0)))
+
(define-public r-tximeta
(package
(name "r-tximeta")