guix-commits
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

207/353: gnu: r-rbowtie2: Update to 2.0.0.


From: guix-commits
Subject: 207/353: gnu: r-rbowtie2: Update to 2.0.0.
Date: Thu, 4 Nov 2021 18:14:45 -0400 (EDT)

rekado pushed a commit to branch r-updates
in repository guix.

commit 98e4bca1a307e4a99a5f342b91544cf566dfc7f6
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Nov 4 22:04:28 2021 +0000

    gnu: r-rbowtie2: Update to 2.0.0.
    
    * gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.0.0.
    [inputs]: Add samtools.
    [propagated-inputs]: Add r-magrittr and r-rsamtools.
---
 gnu/packages/bioconductor.scm | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c1b7f0d..766e4fa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9007,18 +9007,22 @@ This algorithm is based on the publication by Hart et 
al., 2013 (Pubmed ID
 (define-public r-rbowtie2
   (package
     (name "r-rbowtie2")
-    (version "1.14.0")
+    (version "2.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "Rbowtie2" version))
        (sha256
         (base32
-         "0r5yqjal48xlcv5cidi7p3zwygvsllmv2zzkwkc9kfq083l2i4ih"))))
+         "0xpvrx2ak9x913sym4l46ycwbnmpcdwb3bf3dfd2gsp0krv8vh1x"))))
     (properties `((upstream-name . "Rbowtie2")))
     (build-system r-build-system)
+    (propagated-inputs
+     `(("r-magrittr" ,r-magrittr)
+       ("r-rsamtools" ,r-rsamtools)))
     (inputs
-     `(("zlib" ,zlib)))
+     `(("samtools" ,samtools)
+       ("zlib" ,zlib)))
     (native-inputs
      `(("r-knitr" ,r-knitr)))
     (home-page "https://bioconductor.org/packages/Rbowtie2/";)



reply via email to

[Prev in Thread] Current Thread [Next in Thread]