guix-commits
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

02/03: gnu: Remove python2-biom-format.


From: guix-commits
Subject: 02/03: gnu: Remove python2-biom-format.
Date: Fri, 3 Dec 2021 07:49:45 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit aa2d5ca02e2c69530a230348636d5213e0572df4
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Dec 3 13:29:24 2021 +0100

    gnu: Remove python2-biom-format.
    
    There are no users of this variant, and the current version of biom-format
    does not support Python 2.
    
    * gnu/packages/bioinformatics.scm (python2-biom-format): Remove variable.
    (python-biom-format)[properties]: Remove field.
---
 gnu/packages/bioinformatics.scm | 18 +-----------------
 1 file changed, 1 insertion(+), 17 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5b87248..179af04 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1094,23 +1094,7 @@ Python.")
 representing counts of observations e.g. operational taxonomic units, KEGG
 orthology groups or lipid types, in one or more biological samples
 e.g. microbiome samples, genomes, metagenomes.")
-    (license license:bsd-3)
-    (properties `((python2-variant . ,(delay python2-biom-format))))))
-
-(define-public python2-biom-format
-  (let ((base (package-with-python2 (strip-python2-variant 
python-biom-format))))
-    (package
-      (inherit base)
-      (arguments
-       (substitute-keyword-arguments (package-arguments base)
-         ((#:phases phases)
-          `(modify-phases ,phases
-             ;; Do not require the unmaintained pyqi library.
-             (add-after 'unpack 'remove-pyqi
-               (lambda _
-                 (substitute* "setup.py"
-                   (("install_requires.append\\(\"pyqi\"\\)") "pass"))
-                 #t)))))))))
+    (license license:bsd-3)))
 
 (define-public python-pairtools
   (package



reply via email to

[Prev in Thread] Current Thread [Next in Thread]