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15/18: gnu: Add julia-biosequences.
From: |
guix-commits |
Subject: |
15/18: gnu: Add julia-biosequences. |
Date: |
Mon, 10 Jan 2022 08:19:52 -0500 (EST) |
efraim pushed a commit to branch master
in repository guix.
commit 5d697044a84b03e83ea4716022453cf0d26f6b4a
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Tue Jan 4 23:47:53 2022 +0100
gnu: Add julia-biosequences.
* gnu/packages/julia-xyz.scm (julia-biosequences): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
---
gnu/packages/julia-xyz.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index f747c72a42..27daf975f1 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -387,6 +387,37 @@ many of the other BioJulia packages. This package defines
IO, exceptions, and
other types or methods used by other BioJulia packages.")
(license license:expat))))
+(define-public julia-biosequences
+ (package
+ (name "julia-biosequences")
+ (version "2.0.5")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/BioJulia/BioSequences.jl")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0ns6zk0zvnsf4hlsys9ck2xrn20qck0b0aghh484vc6n458zq2gw"))))
+ (build-system julia-build-system)
+ (propagated-inputs
+ (list julia-biogenerics
+ julia-biosymbols
+ julia-combinatorics
+ julia-indexablebitvectors
+ julia-stablerngs
+ julia-twiddle))
+ (native-inputs
+ (list julia-statsbase
+ julia-yaml))
+ (home-page "https://biojulia.net/BioSequences.jl/stable/")
+ (synopsis "Data types and methods for common operations with biological
sequences")
+ (description "This package provides Data types and methods for common
+operations with biological sequences, including DNA, RNA, and amino acid
+sequences.")
+ (license license:expat)))
+
(define-public julia-biosymbols
(package
(name "julia-biosymbols")
- 11/18: gnu: Add julia-automa., (continued)
- 11/18: gnu: Add julia-automa., guix-commits, 2022/01/10
- 13/18: gnu: Add julia-yaml., guix-commits, 2022/01/10
- 16/18: gnu: Add julia-intervaltrees., guix-commits, 2022/01/10
- 04/18: gnu: julia-documentertools: Adjust style., guix-commits, 2022/01/10
- 02/18: build: julia-build-system: Create 'Project.toml' file when missing., guix-commits, 2022/01/10
- 01/18: gnu: julia-xyz.scm: Adjust style., guix-commits, 2022/01/10
- 05/18: gnu: julia-documenter: Adjust style., guix-commits, 2022/01/10
- 07/18: gnu: Add julia-indexablebitvectors., guix-commits, 2022/01/10
- 10/18: gnu: Add julia-scanbyte., guix-commits, 2022/01/10
- 14/18: gnu: Add julia-biosymbols., guix-commits, 2022/01/10
- 15/18: gnu: Add julia-biosequences.,
guix-commits <=
- 17/18: gnu: Add julia-bioalignments., guix-commits, 2022/01/10
- 18/18: gnu: julia-simd: Update to 3.4.0., guix-commits, 2022/01/10