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155/204: gnu: python-pynndescent: Update to 0.5.6.
From: |
guix-commits |
Subject: |
155/204: gnu: python-pynndescent: Update to 0.5.6. |
Date: |
Wed, 20 Apr 2022 02:03:39 -0400 (EDT) |
apteryx pushed a commit to branch wip-ipython-polyglossia
in repository guix.
commit b1a457d438fe0d15984df6625fbd5e8f2f4aba41
Author: Maxim Cournoyer <maxim.cournoyer@gmail.com>
AuthorDate: Mon Apr 18 17:43:43 2022 -0400
gnu: python-pynndescent: Update to 0.5.6.
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
---
gnu/packages/machine-learning.scm | 18 +++++++++++-------
1 file changed, 11 insertions(+), 7 deletions(-)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index b765257d98..5f14453f01 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1210,13 +1210,13 @@ for scientific computing and data science (e.g. BLAS
and OpenMP).")
(define-public python-pynndescent
(package
(name "python-pynndescent")
- (version "0.5.5")
+ (version "0.5.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pynndescent" version))
(sha256
- (base32 "10pqqqc3jkpw03cyzy04slxmpgyhqnlgbyk0c1cv7kqr5d0zhzbs"))))
+ (base32 "0p3jsdcprjfzz7qf5674dsqfpvdn6p4wgqikg7b6ki5abf433yv1"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -1224,12 +1224,16 @@ for scientific computing and data science (e.g. BLAS
and OpenMP).")
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
- (add-installed-pythonpath inputs outputs)
- (invoke "python" "-m" "pytest" "--pyargs" "pynndescent")))))))
- (native-inputs
- (list python-pytest))
+ (invoke "python" "-m" "pytest" "--pyargs" "pynndescent"
+ ;; wminkowski no longer exists in scipy 1.8.0 (see:
+ ;; https://github.com/lmcinnes/pynndescent/issues/177)
+ "-k" "not test_weighted_minkowski")))))))
+ (native-inputs (list python-pytest))
(propagated-inputs
- (list python-joblib python-llvmlite python-numba python-scikit-learn
+ (list python-joblib
+ python-llvmlite
+ python-numba
+ python-scikit-learn
python-scipy))
(home-page "https://github.com/lmcinnes/pynndescent")
(synopsis "Nearest neighbor descent for approximate nearest neighbors")
- 137/204: gnu: python-uvicorn: Update to 0.17.6., (continued)
- 137/204: gnu: python-uvicorn: Update to 0.17.6., guix-commits, 2022/04/20
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- 121/204: gnu: Add python-pep621., guix-commits, 2022/04/20
- 130/204: gnu: Add python-openapi-schema-validator., guix-commits, 2022/04/20
- 136/204: gnu: python-httpx: Update to 0.22.0., guix-commits, 2022/04/20
- 140/204: gnu: python-sqlalchemy: Update to 1.4.35., guix-commits, 2022/04/20
- 141/204: gnu: Add python-pecan., guix-commits, 2022/04/20
- 142/204: gnu: Add python-aioredis., guix-commits, 2022/04/20
- 152/204: gnu: python-pandas: Build and run tests in parallel., guix-commits, 2022/04/20
- 155/204: gnu: python-pynndescent: Update to 0.5.6.,
guix-commits <=
- 153/204: gnu: python-pandas: Update to 1.4.2., guix-commits, 2022/04/20
- 157/204: gnu: python-jupyter-server: Update to 1.16.0., guix-commits, 2022/04/20
- 158/204: gnu: python-voila: Update to 0.3.5., guix-commits, 2022/04/20
- 159/204: gnu: python-sparqlwrapper: Update to 2.0.0., guix-commits, 2022/04/20
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- 171/204: gnu: python-can: Update to 4.0.0., guix-commits, 2022/04/20
- 174/204: gnu: python-celery: Update to 5.2.6 and enable tests., guix-commits, 2022/04/20
- 177/204: gnu: Add python-toolrack., guix-commits, 2022/04/20