01/03: gnu: Add r-parathyroidse.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 6c21c9fab1079e445e9ea2d23c007247fdac1199
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Mon Aug 22 12:33:19 2022 +0200

    gnu: Add r-parathyroidse.
    
    * gnu/packages/bioconductor.scm (r-parathyroidse): New variable.
---
 gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
 1 file changed, 24 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7d2ca413e9..b4f880a080 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1541,6 +1541,30 @@ harmonized subsetting of rows (features) and columns 
(patients / samples)
 across the entire multi-'omics experiment.")
     (license license:artistic2.0)))
 
+(define-public r-parathyroidse
+  (package
+    (name "r-parathyroidse")
+    (version "1.34.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "parathyroidSE" version
+                                     'experiment))
+              (sha256
+               (base32
+                "1h33x55c4gbzmh085skqif04wdcvjp2l9fm55qzwws27kwd30c16"))))
+    (properties `((upstream-name . "parathyroidSE")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-summarizedexperiment))
+    (home-page "https://bioconductor.org/packages/parathyroidSE";)
+    (synopsis "RangedSummarizedExperiment for RNA-Seq of parathyroid tumors")
+    (description
+     "This package provides @code{RangedSummarizedExperiment} objects of read
+counts in genes and exonic parts for paired-end RNA-Seq data from experiments 
on
+primary cultures of parathyroid tumors.  The sequencing was performed on tumor
+cultures from 4 patients at 2 time points over 3 conditions (DPN, OHT and 
control).")
+    ;; The author(s) mentions only LGPL without any specific version.
+    (license license:lgpl2.1+)))
+
 (define-public r-tcgabiolinksgui-data
   (package
     (name "r-tcgabiolinksgui-data")