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branch master updated: gnu: Add r-maser.
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guix-commits |
Subject: |
branch master updated: gnu: Add r-maser. |
Date: |
Sat, 14 Jan 2023 02:15:03 -0500 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 3e1c85b7ec gnu: Add r-maser.
3e1c85b7ec is described below
commit 3e1c85b7ec9e694168dd322dcc93866b666beba9
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Fri Jan 13 16:07:16 2023 +0100
gnu: Add r-maser.
* gnu/packages/bioconductor.scm (r-maser): New variable.
---
gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++
1 file changed, 32 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c2fa26cb59..ca236bcf75 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6274,6 +6274,38 @@ containing the location/probe set membership mapping.
The other one creates a
package that automatically loads that environment.")
(license license:gpl2+)))
+(define-public r-maser
+ (package
+ (name "r-maser")
+ (version "1.16.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "maser" version))
+ (sha256
+ (base32
+ "1zycx8s046g4d3w5qrn950bmi0nrnq1g7fvqji48mr6hmsyzplvv"))))
+ (properties `((upstream-name . "maser")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-data-table
+ r-dplyr
+ r-dt
+ r-genomeinfodb
+ r-genomicranges
+ r-ggplot2
+ r-gviz
+ r-iranges
+ r-reshape2
+ r-rtracklayer))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/DiogoVeiga/maser")
+ (synopsis "Mapping alternative splicing events to proteins")
+ (description
+ "This package provides functionalities for downstream analysis, annotation
+and visualizaton of alternative splicing events generated by rMATS.")
+ (license license:expat)))
+
(define-public r-metaneighbor
(package
(name "r-metaneighbor")
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