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branch master updated: gnu: python-bulkvis: Reference upstream issue.


From: guix-commits
Subject: branch master updated: gnu: python-bulkvis: Reference upstream issue.
Date: Mon, 05 Jun 2023 11:21:37 -0400

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new 4f2ec0f2d1 gnu: python-bulkvis: Reference upstream issue.
4f2ec0f2d1 is described below

commit 4f2ec0f2d1f1cb136b109f9703f88cebb1356f12
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon Jun 5 17:20:52 2023 +0200

    gnu: python-bulkvis: Reference upstream issue.
    
    * gnu/packages/bioinformatics.scm (python-bulkvis)[arguments]: Add comment
    with link to upstream issue for bokeh compatibility patch.
---
 gnu/packages/bioinformatics.scm | 1 +
 1 file changed, 1 insertion(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5667fba689..509dc3358b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1367,6 +1367,7 @@ experiments.")
        (list #:tests? #f                ;There are no tests
              #:phases
              '(modify-phases %standard-phases
+                ;; See https://github.com/LooseLab/bulkvis/issues/58
                 (add-after 'unpack 'bokeh-compatibility
                   (lambda _
                     (substitute* "bulkvis/bulkvis.py"



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