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Re: [PATCH] Update deeptools.
From: |
Ricardo Wurmus |
Subject: |
Re: [PATCH] Update deeptools. |
Date: |
Thu, 3 Mar 2016 13:32:39 +0100 |
Leo Famulari <address@hidden> writes:
> On Mon, Feb 29, 2016 at 02:47:04PM +0100, Ricardo Wurmus wrote:
>> Hi Guix,
>>
>> the goal of this series of patches is to update deeptools.
>>
>> First I moved the “*-pysam” packages from python.scm to
>> bioinformatics.scm, then updated them. Then added “pybigwig”, cleaned
>> up “deeptools” (used “propagated-inputs” for no good reason), and
>> finally updated the package.
>
> All look good, although can you say if pysam needs setuptools at
> run-time? Or does it make sense to change it to a native-input?
I just rebuild pysam with setuptools and cython moved to native-inputs
and it seems all fine. I’ll push that commit too. Thanks for the hint
and the review!
~~ Ricardo