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[bug#32688] [PATCH] gnu: Add r-absim.
From: |
pimi |
Subject: |
[bug#32688] [PATCH] gnu: Add r-absim. |
Date: |
Mon, 10 Sep 2018 20:30:57 +0200 |
gnu/packages/cran.scm (r-absim): New variable.
---
gnu/packages/cran.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 814439172..fd4929c0f 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -5564,3 +5564,31 @@ gf_density(), and so on, bring the formula interface to
ggplot(). This captures
and extends the excellent simplicity of the lattice-graphics formula interface,
while providing the intuitive capabilities of @code{r-ggplot2}.")
(license license:expat)))
+
+(define-public r-absim
+ (package
+ (name "r-absim")
+ (version "0.2.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "AbSim" version))
+ (sha256
+ (base32 "16ddjk8b6xw80ch4jis1y751i9561wdxh0gifbf15qiz3vjckq8m"))))
+ (properties `((upstream-name . "AbSim")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ape" ,r-ape)
+ ("r-powerlaw" ,r-powerlaw)))
+ (home-page "https://cran.r-project.org/web/packages/AbSim/")
+ (synopsis "Time resolved simulations of antibody repertoires")
+ (description
+ "This package provides simulation methods for the evolution of antibody
repertoires.
+ The heavy and light chain variable region of both human and C57BL/6 mice can
+be simulated in a time-dependent fashion. Both single lineages using one set
of
+V-, D-, and J-genes or full repertoires can be simulated. The algorithm begins
+with an initial V-D-J recombination event, starting the first phylogenetic
tree.
+ Upon completion, the main loop of the algorithm begins, with each iteration
+representing one simulated time step. Various mutation events are possible at
+each time step, contributing to a diverse final repertoire.")
+ (license license:gpl2)))
--
2.17.1
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