[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
[bug#36793] [PATCH 04/11] gnu: Add r-flowcore.
From: |
zimoun |
Subject: |
[bug#36793] [PATCH 04/11] gnu: Add r-flowcore. |
Date: |
Wed, 24 Jul 2019 20:21:57 +0200 |
* gnu/packages/bioconductor.scm (r-flowcore): New variable.
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 18b5711496..3a38042537 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4799,3 +4799,33 @@ read mapping, read counting, SNP calling, structural
variant detection and
gene fusion discovery. It can be applied to all major sequencing techologies
and to both short and long sequence reads.")
(license license:gpl3)))
+
+(define-public r-flowcore
+ (package
+ (name "r-flowcore")
+ (version "1.50.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "flowCore" version))
+ (sha256
+ (base32
+ "0pvcyzycsmgc8iw60q9xnhllfan6ihwpz3gvk8h1n9jmhpxzylan"))))
+ (properties `((upstream-name . "flowCore")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-bh" ,r-bh)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-corpcor" ,r-corpcor)
+ ("r-graph" ,r-graph)
+ ("r-mass" ,r-mass)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rrcov" ,r-rrcov)))
+ (home-page
+ "https://bioconductor.org/packages/flowCore")
+ (synopsis "Basic structures for flow cytometry data")
+ (description
+ "Provides S4 data structures and basic functions to deal with flow
cytometry data.")
+ (license license:artistic2.0)))
--
2.21.0
- [bug#36789] [PATCH 00/11] Add r packages to process flow cytometry data, zimoun, 2019/07/24
- [bug#36790] [PATCH 01/11] gnu: Add r-umap., zimoun, 2019/07/24
- [bug#36791] [PATCH 02/11] gnu: Add r-kableextra., zimoun, 2019/07/24
- [bug#36792] [PATCH 03/11] gnu: Add r-all., zimoun, 2019/07/24
- [bug#36793] [PATCH 04/11] gnu: Add r-flowcore.,
zimoun <=
- [bug#36794] [PATCH 05/11] gnu: Add r-flowutils., zimoun, 2019/07/24
- [bug#36795] [PATCH 06/11] gnu: Add r-consensusclusterplus., zimoun, 2019/07/24
- [bug#36796] [PATCH 07/11] gnu: Add r-flowmeans., zimoun, 2019/07/24
- [bug#36797] [PATCH 08/11] gnu: Add r-flowpeaks., zimoun, 2019/07/24
- [bug#36798] [PATCH 09/11] gnu: Add r-flowsom., zimoun, 2019/07/24
- [bug#36799] [PATCH 10/11] gnu: Add r-mixomics., zimoun, 2019/07/24
- [bug#36800] [PATCH 11/11] gnu: Add r-depecher., zimoun, 2019/07/24