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[bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpic
From: |
Ludovic Courtès |
Subject: |
[bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich |
Date: |
Fri, 23 Oct 2020 17:26:36 +0200 |
User-agent: |
Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) |
Hi Maurice,
Maurice Brémond <Maurice.Bremond@inria.fr> skribis:
> Apparently at the mpich configuration level, using the experimental
> device ch4 instead of ch3 solves the problem : just remove comment on
> "--with-device=ch4:ucx". Reversely, with mpich 3.4a2 (for which ch4 is
> de default) setting --with-device=ch3 leads to the same failure as with
> 3.3.2.
Nice, we have a way forward.
With the patch below, I have successfully built:
guix build mumps-openmpi --with-input=openmpi=mpich
and I confirm that despite the name it depends exclusively on MPICH.
:-)
If that’s fine with you I’ll go ahead and commit it; let me know!
> I also checked sock channel for ch3 : with-device=ch3:sock, but then on
> my laptop, scotch tests hang at
>
> mpirun -n 3 ./test_scotch_dgraph_check data/bump.grf
>
> For the moment, there isn't a stable 3.4 version yet for mpich. I had a
> try with the latest 3.4b1 but a test failed...
We’ll see, but having a solution that works with 3.3 and is likely to
work with 3.4 is good.
I guess we should also check whether we’re obtaining the expected
performance. This builds fine too:
guix build intel-mpi-benchmarks --with-input=openmpi=mpich
Thank you!
Ludo’.
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm
index 06a82cce95..9035147441 100644
--- a/gnu/packages/mpi.scm
+++ b/gnu/packages/mpi.scm
@@ -436,7 +436,12 @@ arrays) that expose a buffer interface.")
`(#:configure-flags
(list "--disable-silent-rules" ;let's see what's happening
"--enable-debuginfo"
- ;; "--with-device=ch4:ucx" ; --with-device=ch4:ofi segfaults in
tests
+
+ ;; Default to "ch4", as will be the case in 3.4. It also works
+ ;; around issues when running test suites of packages that use
+ ;; MPICH: <https://issues.guix.gnu.org/39588#15>.
+ "--with-device=ch4:ucx" ; --with-device=ch4:ofi segfaults in tests
+
(string-append "--with-hwloc-prefix="
(assoc-ref %build-inputs "hwloc"))
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, zimoun, 2020/10/15
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, Ludovic Courtès, 2020/10/16
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, zimoun, 2020/10/16
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, Maurice Brémond, 2020/10/19
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, Ludovic Courtès, 2020/10/20
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, Maurice Brémond, 2020/10/23
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich,
Ludovic Courtès <=
- [bug#39588] gnu: Add mpich, scalapack-mpich, mumps-mpich, pt-scotch-mpich, python-mpi4py-mpich, Maurice Brémond, 2020/10/23
- [bug#39588] (off-topic) double time-machine explanations, zimoun, 2020/10/21
- [bug#39588] (off-topic) double time-machine explanations, Maurice Brémond, 2020/10/23