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[bug#61933] [PATCH vREVISION 8/9] gnu: Add r-hgnchelper.
From: |
Navid Afkhami |
Subject: |
[bug#61933] [PATCH vREVISION 8/9] gnu: Add r-hgnchelper. |
Date: |
Fri, 3 Mar 2023 13:07:22 +0000 |
* gnu/packages/bioinformatics.scm (r-hgnchelper): New variable.
---
gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 42d0923ab1..b179fcb61a 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9139,6 +9139,29 @@ (define-public r-archr
"This package is designed to streamline scATAC analyses in R.")
(license license:gpl2+))))
+(define-public r-hgnchelper
+ (package
+ (name "r-hgnchelper")
+ (version "0.8.1")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "HGNChelper" version))
+ (sha256
+ (base32
+ "0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"))))
+ (properties `((upstream-name . "HGNChelper")))
+ (build-system r-build-system)
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/waldronlab/HGNChelper")
+ (synopsis
+ "Identification and correction of invalid gene symbols for human and
mouse")
+ (description
+ "Set of R functions for identifying and correcting HGNC human gene
symbols.
+In addition, you can identify MGI mouse gene symbols, which have been converted
+to date format by Excel, withdrawn, or aliased. Also contains functions for
+reversibly converting between HGNC symbols and valid R names.")
+ (license license:gpl2+)))
+
(define-public r-icellnet
;; v1.0 tagged in 2020, last commit contains many fixes.
;; DESCRIPTION says Version: 0.0.0.9000.
--
2.34.1
- [bug#61933] [PATCH 0/9] *** A requested with 8 dependencies ***, Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 1/9] gnu: Add r-stringendo., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 2/9] gnu: Add r-readwriter., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 3/9] gnu: Add r-codeandroll2., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 7/9] gnu: Add r-tictoc., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 9/9] gnu: Add r-seurat-utils., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 5/9] gnu: Add r-markdownreports., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 6/9] gnu: Add r-ggexpress., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 4/9] gnu: Add r-markdownhelpers., Navid Afkhami, 2023/03/03
- [bug#61933] [PATCH vREVISION 8/9] gnu: Add r-hgnchelper.,
Navid Afkhami <=
- bug#61933: [PATCH 0/9] *** A requested with 8 dependencies ***, Ricardo Wurmus, 2023/03/03