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[bug#62842] [PATCH 00/11] gnu: maths: dune-*: Update to version 2.9.0


From: Felix Gruber
Subject: [bug#62842] [PATCH 00/11] gnu: maths: dune-*: Update to version 2.9.0
Date: Tue, 2 May 2023 20:18:13 +0000

Hi Ludo’,

On 5/2/23 15:01, Ludovic Courtès wrote:
Felix Gruber <felgru@posteo.net> skribis:

This patchset updates all packages belonging to the Dune finite element
library to the latest release 2.9.0.

There’s one test failure on aarch64-linux:

--8<---------------cut here---------------start------------->8---
  99/106 Test  #99: eigenvaluestest ........................Subprocess 
aborted***Exception:   1.24 sec
Eigenvalues of Rosser matrix: (-1020.05,0) (0.0980486,0) (-1.05342e-14,0) 
(1020.05,0) (1020,0) (1019.9,0) (1000,0) (1000,0)
Eigenvalues of Rosser matrix: (-1020.05,0) (0.0980486,0) (-1.05342e-14,0) 
(1020.05,0) (1020,0) (1019.9,0) (1000,0) (1000,0)
Eigenvalues of Rosser matrix: (-1020.05,0) (0.0980486,0) (-1.05342e-14,0) 
(1020.05,0) (1020,0) (1019.9,0) (1000,0) (1000,0)
terminate called after throwing an instance of 'Dune::MathError'
   what():  MathError 
[testSymmetricFieldMatrix:/tmp/guix-build-dune-common-2.9.0.drv-0/dune-common-2.9.0/dune/common/test/eigenvaluestest.cc:143]:
 Vector computed by FMatrixHelp::eigenValuesVectors is not an eigenvector

[…]
The following tests FAILED:
         99 - eigenvaluestest (Subprocess aborted)
Errors while running CTest
make: *** [Makefile:74: test] Error 8
--8<---------------cut here---------------end--------------->8---

 From <https://ci.guix.gnu.org/build/1228281/details>.

Could you take a look and/or report it upstream?

Thanks for letting me know. I've looked into upstream issues/fixes for this problem and it seems that these aarch64 test failures are a known issue [1]. This bugreport mentions build failures in dune-common's Debian package, which nowadays seems to be patched to disable the failing tests [2].

[1]: https://gitlab.dune-project.org/core/dune-common/-/issues/262
[2]: https://sources.debian.org/src/dune-common/2.9.0-2/debian/patches/disable-long-double-eigenvalue-checks.patch/

I've prepared a patch to apply Debian's patch for disabling the failing tests to our dune-common package. You can find it attached to this email. Can you test if it fixes the aarch64-linux builds (I don't have access to an aarch64 machine)? I hope that this would also fix the build failures for the other dune-* packages on aarch64-linux, which are currently all failing because they depend on the broken dune-common package.

Kind regards,
Felix

Attachment: 0001-gnu-dune-common-Fix-build-on-aarch64-linux.patch
Description: Text Data


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