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[bug#69729] [PATCH 30/41] gnu: proteinortho: Remove dependency on lapack
From: |
Romain GARBAGE |
Subject: |
[bug#69729] [PATCH 30/41] gnu: proteinortho: Remove dependency on lapack. |
Date: |
Mon, 11 Mar 2024 12:07:11 +0100 |
* gnu/packages/bioinformatics.scm (proteinortho): Remove dependency on lapack.
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ac2f7c1ade..98bc05d154 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8673,7 +8673,9 @@ (define-public proteinortho
(substitute* "Makefile"
(("INSTALLDIR=.*")
(string-append
- "INSTALLDIR=" (assoc-ref outputs "out") "/bin\n")))
+ "INSTALLDIR=" (assoc-ref outputs "out") "/bin\n"))
+ (("-llapack -lblas")
+ "-lopenblas"))
#t))
(add-before 'install 'make-install-directory
;; The install directory is not created during 'make install'.
@@ -8697,7 +8699,6 @@ (define-public proteinortho
("perl" ,perl)
("python" ,python-wrapper)
("blast+" ,blast+)
- ("lapack" ,lapack)
("openblas" ,openblas)))
(native-inputs
(list which))
--
2.41.0
- [bug#69729] [PATCH 00/41] Improve performance in lapack dependent packages., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 01/41] gnu: arpack-ng: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 02/41] gnu: armadillo: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 03/41] gnu: octave-cli: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 14/41] gnu: ipopt: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 05/41] gnu: hypre: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 11/41] gnu: gmsh: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 23/41] gnu: bonmin: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 04/41] gnu: scalapack: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 30/41] gnu: proteinortho: Remove dependency on lapack.,
Romain GARBAGE <=
- [bug#69729] [PATCH 36/41] gnu: giac: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 09/41] gnu: sbcl-lla: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 10/41] gnu: itpp: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 08/41] gnu: jags: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 13/41] gnu: fenics-dolfin: Remove dependency on lapack., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 18/41] gnu: p4est: Remove dependency on lapack., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 20/41] gnu: dealii: Remove dependency on lapack., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 27/41] gnu: aoflagger: Remove dependency on lapack., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 39/41] gnu: shogun: Switch to openblas., Romain GARBAGE, 2024/03/11
- [bug#69729] [PATCH 40/41] gnu: kaldi-for-vosk: Remove dependency on lapack., Romain GARBAGE, 2024/03/11