/usr/bin/ld: Unresolved: strnlen

[bioinfo Gu]

Hi,

 

I want to compile one program with gcc, but the system give me error: I am using

OSF1  V5.1 732 alpha

# make
......

gcc  -g  -DRELEASE=1.0beta -DRELEASEDATE="December 2003" -I./h -o targetscan targetscan.o alig
nio.o interleaved.o msf.o selex.o seqencode.o sqerror.o sqio.o getopt.o iupac.o revcomp.o sre_
ctype.o sre_math.o sre_string.o types.o dist_vars.o energy_par.o fold.o fold_vars.o inverse.o
list.o naview.o params.o part_func.o ProfileDist.o read_epars.o RNAstruct.o stringdist.o subop
t.o treedist.o utils.o -lm -lgcc -lc
/usr/bin/ld:
Unresolved:
strnlen
collect2: ld returned 1 exit status
*** Exit 1
Stop.

 

Here is my Makefile:

# Makefile for TargetScan
#
# See "INSTALL" for installation instructions.
# This code is distributed under terms of the GNU General Public License.
# See "README", "COPYING", and "GNULICENSE" for details.
#

RELEASE     = 1.0beta
RELEASEDATE = "December 2003"
RFLAGS      = -DRELEASE=$(RELEASE) -DRELEASEDATE=$(RELEASEDATE)

# Where everything gets installed.
# You might change this to /usr/local/bin and /usr/local/man.
#
BINDIR          = $(HOME)/bin

# Compilation flags. Set your compiler and any necessary global
# switches here. Use an ANSI-compliant C compiler.
#
CC              = gcc
CFLAGS          = -g

# Machine-specific definitions. You shouldn't need any.

#
MDEFS =

#######
## should not need to modify below this line
#######
SHELL  = /bin/sh

PROGS=     targetscan

EXAMPLES=

OBJS=   targetscan.o\
        alignio.o\
        interleaved.o\
        msf.o\
        selex.o\
        seqencode.o\
        sqerror.o\
        sqio.o\
        getopt.o\
        iupac.o\
        revcomp.o\
        sre_ctype.o\
        sre_math.o\
        sre_string.o\
        types.o\
        dist_vars.o\
        energy_par.o\
        fold.o\
        fold_vars.o\
        inverse.o\
        list.o\
        naview.o\
        params.o\
        part_func.o\
        ProfileDist.o\
        read_epars.o\
        RNAstruct.o\
        stringdist.o\
        subopt.o\
        treedist.o\
        utils.o

SQUIDSRC= alignio.c\
        getopt.c\
        interleaved.c\
        sqerror.c\
        sqio.c\
        iupac.c\
        msf.c\
        revcomp.c\
        seqencode.c\
        selex.c\
        sre_ctype.c\
        sre_math.c\
        sre_string.c\
        types.c

SQUIDHDRS= squid.h sqfuncs.h rk.h gnuregex.h

VIENNASRC= dist_vars.c\
        energy_par.c\
        fold.c\
        fold_vars.c\
        inverse.c\
        list.c\
        naview.c\
        params.c\
        part_func.c\
        ProfileDist.c\
        read_epars.c\
        RNAstruct.c\
        stringdist.c\
        subopt.c\
        treedist.c\
        utils.c

VIENNAHDRS= fold_vars.h fold.h part_func.h inverse.h RNAstruct.h\
        treedist.h stringdist.h profiledist.h

SRC="" targetscan.c $(SQUIDSRC) $(VIENNASRC)

HDRS=      seqpattern.h sequence.h

all:  $(OBJS)
        $(CC) $(CFLAGS) $(RFLAGS) -I./h -o targetscan $(OBJS) -lm -lgcc -lc

install: all
        cp $(PROGS)   $(BINDIR)/

clean:
        -rm -f *.o *~ *.aux *.dvi *.log core TAGS $(PROGS)

.c.o:
        $(CC) $(CFLAGS) $(MDEFS) -I./h -c $<

 

Thank you very much.

 

Bio

---

Do you Yahoo!?
Yahoo! SiteBuilder - Free web site building tool. Try it!