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Re: [Help-gsl] solution of 3d quadratic algebraic system
From: |
Sam Mason |
Subject: |
Re: [Help-gsl] solution of 3d quadratic algebraic system |
Date: |
Wed, 31 Oct 2012 09:43:28 +0000 |
On 31 Oct 2012 05:25, "FARKAS, Illes" <address@hidden> wrote:
> Thanks! How about multiple solutions? Biochemical systems often have more
> than one stable solution.
Monte-carlo algorithms tend to be good for this sort of thing. You can get
quite a good idea of the energy landscape this way, although presenting
more than two gets awkward quickly...
> What tools would you or other readers of this list recommend?
Python, R, Matlab/Octave and finally C for performance tends to be my
personal tools of choice here. I tend to use most of them most weeks.
Scala could be a fun one to look at though:
http://darrenjw.wordpress.com/2011/07/16/gibbs-sampler-in-various-languages-revisited/
Sam
- Re: [Help-gsl] solution of 3d quadratic algebraic system, (continued)
- Re: [Help-gsl] solution of 3d quadratic algebraic system, Rhys Ulerich, 2012/10/28
- Re: [Help-gsl] solution of 3d quadratic algebraic system, FARKAS, Illes, 2012/10/29
- Re: [Help-gsl] solution of 3d quadratic algebraic system, FARKAS, Illes, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, Juan Pablo Amorocho, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, FARKAS, Illes, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, FARKAS, Illes, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, David Rideout, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, Sam Mason, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, Rhys Ulerich, 2012/10/30
- Re: [Help-gsl] solution of 3d quadratic algebraic system, FARKAS, Illes, 2012/10/31
- Re: [Help-gsl] solution of 3d quadratic algebraic system,
Sam Mason <=