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problems installing openmpi_ext
From: |
Francis Poulin |
Subject: |
problems installing openmpi_ext |
Date: |
Mon, 12 Aug 2013 12:26:11 +0000 |
Hello,
Sorry for the quick send before. I have looked into the problem and see all
the dependencies are installed and even loaded (probably not necessary).
octave:20> pkg list
Package Name | Version | Installation directory
--------------+---------+-----------------------
bim *| 1.1.2 | /Users/fpoulin/octave/bim-1.1.2
fpl *| 1.3.4 | /Users/fpoulin/octave/fpl-1.3.4
msh *| 1.0.8 | /Users/fpoulin/octave/msh-1.0.8
parallel *| 2.0.5 | /Users/fpoulin/octave/parallel-2.0.5
splines *| 1.2.2 | /Users/fpoulin/octave/splines-1.2.2
Now that I try and install openmpi_ext I get the following error
octave:22> pkg install openmpi_ext-1.1.0.tar.gz
MPI_Iprobe.cc: In function 'Octave_map put_MPI_Stat(const MPI_Status&)':
MPI_Iprobe.cc:38:14: error: 'const struct MPI_Status' has no member named
'_count'
make: *** [MPI_Iprobe.oct] Error 1
'make' returned the following error: /opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Init.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Initialized.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Comm_rank.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Comm_size.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Finalize.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Finalized.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Send.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Recv.cc
/opt/local/bin/mkoctfile-3.6.4
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Iprobe.cc
error: called from 'pkg>configure_make' in file
/opt/local/share/octave/3.6.4/m/pkg/pkg.m near line 1385, column 9
error: called from:
error: /opt/local/share/octave/3.6.4/m/pkg/pkg.m at line 827, column 5
error: /opt/local/share/octave/3.6.4/m/pkg/pkg.m at line 383, column 9
I have two versions of octave installed, one through macports and the other
through fink. Maybe there is a conflict somewhere? If there is an easier way
to install it in my mac that would be great to know.
Cheers, Francis
Re: problems installing openmpi_ext, c., 2013/08/14