Hi Loic,
absolute coordinates are currently not really handled in a nice way, improvements welcome.
What you can do is to add <define name="USE_INS_NAV_INIT" value=TRUE"/>
This will initialize the ground reference (origin of the LTP) with the flight plan coordinates, instead of leaving it uninitialized (to be set from the GPS fix with NavSetGroundReferenceHere).
You still need to remove NavSetGroundReferenceHere from your geo init though, as that would just reset it to the current position.
If you still want your home waypoint to be automatically set to where you start, in geo init: <call fun="NavSetWaypointHere(WP_HOME)"/>
Hope that helps...
Cheers, Felix