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01/15: gnu: ribotaper: Simplify with G-expression.
From: |
guix-commits |
Subject: |
01/15: gnu: ribotaper: Simplify with G-expression. |
Date: |
Fri, 12 May 2023 17:25:42 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit fac8721bfd9516fec63c39c2bfe8ccbd3f6f0e1e
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri May 12 22:21:14 2023 +0200
gnu: ribotaper: Simplify with G-expression.
* gnu/packages/bioinformatics.scm (ribotaper)[arguments]: Use G-expression
and
drop trailing #T from build phase.
---
gnu/packages/bioinformatics.scm | 27 +++++++++++++--------------
1 file changed, 13 insertions(+), 14 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d1de973274..b3576159ed 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1152,20 +1152,19 @@ cpp.find_library('hdf5_cpp', dirs : '~a'), "
"0ykjbps1y3z3085q94npw8i9x5gldc6shy8vlc08v76zljsm07hv"))))
(build-system gnu-build-system)
(arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'install 'wrap-executables
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let* ((out (assoc-ref outputs "out")))
- (for-each
- (lambda (script)
- (wrap-program (string-append out "/bin/" script)
- `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE")))))
- '("create_annotations_files.bash"
- "create_metaplots.bash"
- "Ribotaper_ORF_find.sh"
- "Ribotaper.sh")))
- #t)))))
+ (list
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'install 'wrap-executables
+ (lambda _
+ (for-each
+ (lambda (script)
+ (wrap-program (string-append #$output "/bin/" script)
+ `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE")))))
+ '("create_annotations_files.bash"
+ "create_metaplots.bash"
+ "Ribotaper_ORF_find.sh"
+ "Ribotaper.sh")))))))
(inputs
(list bedtools-2.18
samtools-0.1
- branch master updated (0e20ed322d -> d67a3622ef), guix-commits, 2023/05/12
- 01/15: gnu: ribotaper: Simplify with G-expression.,
guix-commits <=
- 03/15: gnu: methyldackel: Simplify arguments., guix-commits, 2023/05/12
- 02/15: gnu: phast: Simplify by using G-expression., guix-commits, 2023/05/12
- 06/15: gnu: samblaster: Update to 0.1.26., guix-commits, 2023/05/12
- 04/15: gnu: methyldackel: Update to 0.6.1., guix-commits, 2023/05/12
- 07/15: gnu: multichoose: Clean up., guix-commits, 2023/05/12
- 08/15: gnu: arriba: Use SEARCH-INPUT-FILE and -DIRECTORY., guix-commits, 2023/05/12
- 11/15: gnu: python-seaborn: Simplify by using pyproject-build-system., guix-commits, 2023/05/12
- 12/15: gnu: python-pyproject-metadata: Simplify by using pyproject-build-system., guix-commits, 2023/05/12
- 14/15: gnu: python-orjson: Reuse phases from pyproject-build-system., guix-commits, 2023/05/12
- 09/15: gnu: jamm: Use G-expression., guix-commits, 2023/05/12