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04/05: gnu: Add r-powertcr.
From: |
guix-commits |
Subject: |
04/05: gnu: Add r-powertcr. |
Date: |
Sat, 4 Nov 2023 18:14:29 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 01b7d917a2367f69ebfdff6d7587bfe19fd0c86d
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Fri Nov 3 17:30:03 2023 +0100
gnu: Add r-powertcr.
* gnu/packages/bioconductor.scm (r-powertcr): New variable.
Change-Id: I75fc30a7021d6199b768318da3afcfeaaafcf027
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0d4a27981c..6a249bcd50 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9529,6 +9529,37 @@ package contains functions for combining the results of
multiple runs of gene
set analyses.")
(license license:gpl2+)))
+(define-public r-powertcr
+ (package
+ (name "r-powertcr")
+ (version "1.22.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "powerTCR" version))
+ (sha256
+ (base32 "06fmphdq95pjbbvm8m8h1wajbp3vhl0zj7ddbzks9fy7ankp1n3i"))))
+ (properties `((upstream-name . "powerTCR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-cubature
+ r-doparallel
+ r-evmix
+ r-foreach
+ r-magrittr
+ r-purrr
+ r-truncdist
+ r-vegan
+ r-vgam))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/powerTCR")
+ (synopsis "Model-based comparative analysis of the TCR repertoire")
+ (description
+ "This package provides a model for the clone size distribution of the
+@acronym{TCR, T-cell receptor} repertoire. Further, it permits comparative
+analysis of TCR repertoire libraries based on theoretical model fits.")
+ (license license:artistic2.0)))
+
;; This is a CRAN package, but it depends on a Bioconductor package:
;; r-aroma-light, r-dnacopy..
(define-public r-pscbs