06/06: gnu: Add r-jaspar2020.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit c1fda6cf61d4044d65c694cd309ca88c6b1ed5b7
Author: nafkhamdc <navid.afkhami@mdc-berlin.de>
AuthorDate: Wed Jan 10 14:22:37 2024 +0000

    gnu: Add r-jaspar2020.
    
    * gnu/packages/bioconductor.scm (r-jaspar2020): New variable.
    
    Change-Id: I84f0fc2a7defc5d179ffc24aa1f30177cb3b3060
---
 gnu/packages/bioconductor.scm | 19 +++++++++++++++++++
 1 file changed, 19 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 326b5b4ab2..bc2ae42165 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -157,6 +157,25 @@ descriptions can discover new relationships between genes 
and disease, and new
 functions for previous uncharacteried genes and alleles.")
     (license license:artistic2.0)))
 
+(define-public r-jaspar2020
+  (package
+    (name "r-jaspar2020")
+    (version "0.99.10")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "JASPAR2020" version 'annotation))
+       (sha256
+        (base32 "0nrp63z7q2ivv5h87f7inpp2qll2dfgj4227l4rbnzii38a2vfdr"))))
+    (properties `((upstream-name . "JASPAR2020")))
+    (build-system r-build-system)
+    (native-inputs (list r-knitr))
+    (home-page "https://jaspar.elixir.no/";)
+    (synopsis "Data package for JASPAR database (version 2020)")
+    (description "Data package for JASPAR2020.  To explore these databases,
+utilize the TFBSTools package (version 1.23.1 or higher).")
+    (license license:gpl2)))
+
 (define-public r-mafh5-gnomad-v3-1-2-grch38
   (package
     (name "r-mafh5-gnomad-v3-1-2-grch38")