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15/55: gnu: python-pynndescent: Update to 0.5.11.
From: |
guix-commits |
Subject: |
15/55: gnu: python-pynndescent: Update to 0.5.11. |
Date: |
Mon, 15 Jan 2024 07:42:21 -0500 (EST) |
rekado pushed a commit to branch wip-python-science
in repository guix.
commit 6cf75e7d20f2ae96f26a271cc7c65edb470dba0a
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon Jan 8 15:28:10 2024 +0100
gnu: python-pynndescent: Update to 0.5.11.
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.11.
[build-system]: Use pyproject-build-system.
[arguments]: Remove.
[propagated-inputs]: Add python-importlib-metadata.
Change-Id: I14f15ea98157ed15b360971c30fe00c5f00af4a7
---
gnu/packages/machine-learning.scm | 19 +++++--------------
1 file changed, 5 insertions(+), 14 deletions(-)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index d8a9f4d13a..f34e6dd5a4 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1891,27 +1891,18 @@ It is compatible with @code{scikit-learn}.")
(define-public python-pynndescent
(package
(name "python-pynndescent")
- (version "0.5.10")
+ (version "0.5.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pynndescent" version))
(sha256
- (base32 "1bc8aa6jfw28y6sb0nvfdrfgh66a42bqb4znvpimzx9yq21wcpax"))))
- (build-system python-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (replace 'check
- (lambda* (#:key inputs outputs tests? #:allow-other-keys)
- (when tests?
- (invoke "python" "-m" "pytest" "--pyargs" "pynndescent"
- ;; wminkowski no longer exists in scipy 1.8.0 (see:
- ;; https://github.com/lmcinnes/pynndescent/issues/177)
- "-k" "not test_weighted_minkowski")))))))
+ (base32 "0l5dpdsk5vg7rpay81bncp04119hnl5z7zxjv63jrnm9spcwwi3g"))))
+ (build-system pyproject-build-system)
(native-inputs (list python-pytest))
(propagated-inputs
- (list python-joblib
+ (list python-importlib-metadata
+ python-joblib
python-llvmlite
python-numba
python-scikit-learn
- 28/55: gnu: python-pyani: Disable tests., (continued)
- 28/55: gnu: python-pyani: Disable tests., guix-commits, 2024/01/15
- 25/55: gnu: python-poliastro: Make compatible with latest matplotlib., guix-commits, 2024/01/15
- 29/55: gnu: python-pegasusio: Disable tests., guix-commits, 2024/01/15
- 30/55: gnu: python-reportlab: Update to 4.0.8., guix-commits, 2024/01/15
- 32/55: gnu: python-plastid: Update to 0.6.1., guix-commits, 2024/01/15
- 35/55: gnu: python-demuxem: Disable tests., guix-commits, 2024/01/15
- 38/55: gnu: python-fit-nbinom: Disable tests., guix-commits, 2024/01/15
- 36/55: gnu: python-cartopy: Update to 0.22.0., guix-commits, 2024/01/15
- 42/55: gnu: python-pint: Add missing input., guix-commits, 2024/01/15
- 08/55: gnu: python-tifffile: Update to 2023.12.9., guix-commits, 2024/01/15
- 15/55: gnu: python-pynndescent: Update to 0.5.11.,
guix-commits <=
- 24/55: gnu: python-cleanlab: Disable test_aux_inputs, enable other tests., guix-commits, 2024/01/15
- 12/55: gnu: python-pypng: Update to 0.20220715.0., guix-commits, 2024/01/15
- 31/55: gnu: cnvkit: Update to 0.9.10., guix-commits, 2024/01/15
- 33/55: gnu: python-cooler: Update to 0.9.1., guix-commits, 2024/01/15
- 34/55: gnu: python-pint: Update to 0.23., guix-commits, 2024/01/15
- 41/55: gnu: python-hicexplorer: Make compatible with latest scipy., guix-commits, 2024/01/15
- 45/55: gnu: datasette: Update to 1.0a7., guix-commits, 2024/01/15
- 49/55: gnu: python-adjusttext: Disable tests., guix-commits, 2024/01/15
- 50/55: gnu: python-mysql-connector-python: Defuse time bomb., guix-commits, 2024/01/15
- 52/55: gnu: python-xarray: Update to 2023.12.0., guix-commits, 2024/01/15