bug#63976: closed ([PATCH] gnu: Add python-mudata.)

[GNU bug Tracking System]

Your message dated Fri, 09 Jun 2023 17:09:55 +0200
with message-id <87cz24oen0.fsf@elephly.net>
and subject line [PATCH] gnu: Add python-mudata.
has caused the debbugs.gnu.org bug report #63976,
regarding [PATCH] gnu: Add python-mudata.
to be marked as done.

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-- 
63976: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=63976
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-mudata.
>
>
>
>
> Date: 
>
> Fri, 9 Jun 2023 16:56:34 +0200
>
>
>
>
> * gnu/packages/bioinformatics.scm (python-mudata): New variable.
> ---
>  gnu/packages/bioinformatics.scm | 26 ++++++++++++++++++++++++++
>  1 file changed, 26 insertions(+)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 1caea80f86..13ae47d858 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -3352,6 +3352,32 @@ (define-public python-mofax
>  models trained with MOFA+ in Python.")
>        (license license:expat))))
>  
> +(define-public python-mudata
> +  (let ((commit "392f5464135d687fe64bc571d35cbf557b796ff0")
> +        (revision "0"))
> +    (package
> +      (name "python-mudata")
> +      (version (git-version "0.2.3" revision commit))
> +      (source (origin
> +                (method git-fetch)
> +                (uri (git-reference
> +                      (url "https://github.com/scverse/mudata";)
> +                      (commit commit)))
> +                (file-name (git-file-name name version))
> +                (sha256
> +                 (base32
> +                  "02h0k1q57589r0hdv8nwg1vk7g2ljvn5g66c47fy5gdilbm3gjws"))))
> +      (build-system pyproject-build-system)
> +      (propagated-inputs (list python-anndata python-h5py python-pandas 
> python-flit-core))
> +      (native-inputs (list python-numpy python-pytest python-zarr))
> +      (home-page "https://github.com/scverse/mudata";)
> +      (synopsis "Python package for multi-omics data analysis")
> +      (description
> +       "Mudata is a Python package for multi-omics data analysis.
> +It is designed to provide functionality to load, process, and store
> +multimodal omics data.")
> +      (license license:bsd-3))))
> +
>  (define-public python-pyega3
>    (package
>      (name "python-pyega3")
>
> base-commit: dd587a4fefbd8841f609910af36e13aa890781b7
> prerequisite-patch-id: c5352e197d46cff8e37f0ff85044983c550a9663
> -- 
> 2.34.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-mudata.
>
>
>
>
> Date: 
>
> Fri, 09 Jun 2023 17:09:55 +0200
>
>
>
>
> User-agent: 
>
> mu4e 1.10.2; emacs 28.2
>
>
>
>
> I simplified this a little and pushed this with commit
> 74443c30f3e20655a046c0d3ea236822ef130968.
>
> Thank you!
>
> -- 
> Ricardo
>
>
> --- End Message ---