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[Espressomd-maintainer] Build failed in Jenkins: master-nightly-distchec
From: |
Jenkins Demon |
Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #307 |
Date: |
Fri, 26 Feb 2016 00:56:32 +0100 (CET) |
See <http://espressomd.org/jenkins/job/master-nightly-distcheck/307/changes>
Changes:
[Florian Weik] cmake: Fixed build when CUDA not found, and feature summary.
[Florian Weik] tk: Removed rests of TK support.
[Florian Weik] cmake: Avoid interface warning for empty library.
[Florian Weik] cmake: New and hopefully better dependencies, changing the
myconfig.hpp
[Florian Weik] cmake: Better dependency tracking for testsuite. Tartget check
builds
[Florian Weik] cmake: Python wrapper for tcl tests to handle skip case which is
not
[Florian Weik] cmake: Don't use all cores for testing.
[Florian Weik] Revert "tk: Removed rests of TK support."
[Florian Weik] cmake: Remove tk from cmake.
------------------------------------------
[...truncated 1307 lines...]
CXX object-in-fluid/out_direction.lo
CXX hydrogen_bond.lo
CXX twist_stack.lo
CXX immersed_boundary/ibm_main.lo
CXX immersed_boundary/ibm_triel.lo
CXX immersed_boundary/ibm_volume_conservation.lo
CXX immersed_boundary/ibm_tribend.lo
CXX immersed_boundary/ibm_cuda_interface.lo
CXX debye_hueckel.lo
CXX elc.lo
CXX magnetic_non_p3m_methods.lo
CXX mdlc_correction.lo
CXX maggs.lo
CXX mmm1d.lo
CXX mmm2d.lo
CXX mmm-common.lo
CXX p3m.lo
CXX p3m-common.lo
CXX p3m-dipolar.lo
CXX reaction_field.lo
CXX actor/ActorList.lo
CXX actor/HarmonicWell.lo
CXX actor/HarmonicOrientationWell.lo
CXX actor/Mmm1dgpuForce.lo
CXX actor/EwaldGPU.lo
CXX actor/DipolarDirectSum.lo
GEN config-version.cpp
CXX config-version.lo
NVCC cuda_init_cuda.lo
NVCC cuda_common_cuda.lo
NVCC electrokinetics_cuda.lo
NVCC fd-electrostatics_cuda.lo
NVCC lbgpu_cuda.lo
NVCC p3m_gpu_cuda.lo
NVCC EspressoSystemInterface_cuda.lo
NVCC integrate_sd_cuda.lo
NVCC integrate_sd_cuda_kernel.lo
NVCC integrate_sd_cuda_debug.lo
NVCC integrate_sd_matrix.lo
NVCC integrate_sd_cuda_device.lo
NVCC actor/Mmm1dgpuForce_cuda.lo
NVCC actor/EwaldGPU_cuda.lo
NVCC actor/HarmonicWell_cuda.lo
NVCC immersed_boundary/ibm_cuda.lo
NVCC actor/DipolarDirectSum_cuda.lo
NVCC actor/HarmonicOrientationWell_cuda.lo
NVCC p3m_gpu_error_cuda.lo
CXXLD libEspresso.la
make[6]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/core'>
make[5]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/core'>
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/core'>
Making all in tcl
make[4]: Entering directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/tcl'>
CXX bin_tcl.lo
CXX binary_file_tcl.lo
CXX blockfile_tcl.lo
CXX h5mdfile_tcl.lo
CXX rotate_system_tcl.lo
CXX readpdb_tcl.lo
CXX cells_tcl.lo
CXX channels_tcl.lo
CXX collision_tcl.lo
CXX comfixed_tcl.lo
CXX comforce_tcl.lo
CXX config_tcl.lo
CXX constraint_tcl.lo
CXX domain_decomposition_tcl.lo
CXX electrokinetics_tcl.lo
CXX external_potential_tcl.lo
CXX energy_tcl.lo
CXX galilei_tcl.lo
CXX global_tcl.lo
CXX grid_tcl.lo
CXX iccp3m_tcl.lo
CXX imd_tcl.lo
CXX initialize_interpreter.lo
CXX integrate_tcl.lo
CXX interaction_data_tcl.lo
CXX lb-boundaries_tcl.lo
CXX lb_tcl.lo
CXX lees_edwards_tcl.lo
CXX metadynamics_tcl.lo
CXX nemd_tcl.lo
CXX mol_cut_tcl.lo
CXX parser.lo
CXX particle_data_tcl.lo
CXX polymer_tcl.lo
CXX pressure_tcl.lo
CXX random_tcl.lo
CXX reaction_tcl.lo
CXX rattle_tcl.lo
CXX statistics_chain_tcl.lo
CXX statistics_cluster_tcl.lo
CXX statistics_correlation_tcl.lo
CXX statistics_fluid_tcl.lo
CXX statistics_observable_tcl.lo
CXX statistics_wallstuff_tcl.lo
CXX statistics_tcl.lo
CXX thermostat_tcl.lo
CXX topology_tcl.lo
CXX tuning_tcl.lo
CXX uwerr_tcl.lo
CXX virtual_sites_com_tcl.lo
CXX ghmc_tcl.lo
CXX twist_stack_tcl.lo
CXX hydrogen_bond_tcl.lo
CXX minimize_energy_tcl.lo
CXX integrate_sd_tcl.lo
CXX bmhtf-nacl_tcl.lo
CXX buckingham_tcl.lo
CXX cos2_tcl.lo
CXX dpd_tcl.lo
CXX forcecap_tcl.lo
CXX gaussian_tcl.lo
CXX gb_tcl.lo
CXX hat_tcl.lo
CXX hertzian_tcl.lo
CXX lj_tcl.lo
CXX ljangle_tcl.lo
CXX ljcos2_tcl.lo
CXX ljcos_tcl.lo
CXX ljgen_tcl.lo
CXX morse_tcl.lo
CXX soft_sphere_tcl.lo
CXX object-in-fluid/affinity_tcl.lo
CXX object-in-fluid/membrane_collision_tcl.lo
CXX steppot_tcl.lo
CXX tab_tcl.lo
CXX tunable_slip_tcl.lo
CXX angle_tcl.lo
CXX angle_harmonic_tcl.lo
CXX angle_cosine_tcl.lo
CXX angle_cossquare_tcl.lo
CXX angledist_tcl.lo
CXX dihedral_tcl.lo
CXX endangledist_tcl.lo
CXX fene_tcl.lo
CXX harmonic_dumbbell_tcl.lo
CXX harmonic_tcl.lo
CXX quartic_tcl.lo
CXX bonded_coulomb_tcl.lo
CXX overlap_tcl.lo
CXX subt_lj_tcl.lo
CXX umbrella_tcl.lo
CXX object-in-fluid/oif_global_forces_tcl.lo
CXX object-in-fluid/oif_local_forces_tcl.lo
CXX object-in-fluid/out_direction_tcl.lo
CXX immersed_boundary/ibm_triel_tcl.lo
CXX immersed_boundary/ibm_volume_conservation_tcl.lo
CXX immersed_boundary/ibm_tribend_tcl.lo
CXX debye_hueckel_tcl.lo
CXX elc_tcl.lo
CXX magnetic_non_p3m_methods_tcl.lo
CXX maggs_tcl.lo
CXX mmm1d_tcl.lo
CXX mmm2d_tcl.lo
CXX p3m-dipolar_tcl.lo
CXX p3m_tcl.lo
CXX reaction_field_tcl.lo
CXX mdlc_correction_tcl.lo
CXX actor/Mmm1dgpu_tcl.lo
CXX actor/Ewaldgpu_tcl.lo
CXX actor/DipolarDirectSum_tcl.lo
CXX actor/HarmonicWell_tcl.lo
CXX actor/HarmonicOrientationWell_tcl.lo
CXX cuda_init_tcl.lo
CXXLD libEspressoTcl.la
CXX libEspressoTcl4Py_la-scriptsdir.lo
CXXLD libEspressoTcl4Py.la
CXX Espresso_install-scriptsdir.o
CXX Espresso_install-main.o
NVCC cuda_workaround.o
CXXLD Espresso.install
CXX Espresso-scriptsdir.o
CXX Espresso-main.o
CXXLD Espresso
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/tcl'>
Making all in python/espressomd
make[4]: Entering directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/python/espressomd'>
GEN gen_pxiconfig.cpp
Reading definitions from ../../../../src/features.def...
Done.
Writing gen_pxiconfig.cpp...
Done.
CXXLD gen_pxiconfig
GEN myconfig.pxi
make all-am
make[5]: Entering directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/python/espressomd'>
CXX dummy.o
CXXLD dummy
GEN python-all
CYTHON _init.cpp
CXX _init.lo
CXXLD _init.la
libtool: link: warning: ignoring multiple `-rpath's for a libtool library
GEN libEspresso.so
GEN _init.so
CYTHON _system.cpp
CXX _system.lo
In file included from ../../../../src/core/domain_decomposition.hpp:62:0,
from _system.cpp:317:
../../../../src/core/thermostat.hpp: In function 'void
friction_thermo_langevin(Particle*)':
../../../../src/core/thermostat.hpp:181:52: warning: unused variable
'langevin_temp_coeff' [-Wunused-variable]
double langevin_pref1_temp, langevin_pref2_temp, langevin_temp_coeff;
^
CXXLD _system.la
libtool: link: warning: ignoring multiple `-rpath's for a libtool library
GEN _system.so
CYTHON actors.cpp
CXX actors.lo
CXXLD actors.la
libtool: link: warning: ignoring multiple `-rpath's for a libtool library
GEN actors.so
CYTHON analyze.cpp
Error compiling Cython file:
------------------------------------------------------------
...
cdef double binwd_axial = c_length / c_bins_axial
cdef double binwd_radial = c_radius / c_bins_radial
cdef double binvolume, pos_radial, pos_axial
cdef vector[string] names = ["density", "v_r", "v_t"]
^
------------------------------------------------------------
<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/src/python/espressomd/analyze.pyx>:223:32:
Cannot coerce list to type 'vector[string]'
Makefile:755: recipe for target 'analyze.cpp' failed
make[5]: *** [analyze.cpp] Error 1
make[5]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/python/espressomd'>
Makefile:445: recipe for target 'all' failed
make[4]: *** [all] Error 2
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src/python/espressomd'>
Makefile:449: recipe for target 'all-recursive' failed
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src'>
Makefile:387: recipe for target 'all' failed
make[2]: *** [all] Error 2
make[2]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build/src'>
Makefile:475: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/espresso-3.4-dev-1849-g96bebad/_build'>
Makefile:678: recipe for target 'distcheck' failed
make: *** [distcheck] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts