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[Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #3
From: |
Jenkins Demon |
Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #338 |
Date: |
Sat, 4 Jun 2016 03:41:12 +0200 (CEST) |
See <http://espressomd.org/jenkins/job/master-nightly-mpich/338/changes>
Changes:
[Florian Weik] testsuite: Fixed names of engine python tests.
------------------------------------------
[...truncated 505 lines...]
CXX virtual_sites_relative.lo
CXX vmdsock.lo
CXX ghmc.lo
CXX Vector.lo
CXX SystemInterface.lo
CXX integrate_sd.lo
CXX EspressoSystemInterface.lo
CXX PdbParser.lo
CXX mpiio.lo
CXX bmhtf-nacl.lo
CXX buckingham.lo
CXX cos2.lo
CXX dpd.lo
CXX gaussian.lo
CXX gb.lo
CXX hat.lo
CXX hertzian.lo
CXX lj.lo
CXX ljangle.lo
CXX ljcos.lo
CXX ljcos2.lo
CXX ljgen.lo
CXX morse.lo
CXX soft_sphere.lo
CXX steppot.lo
CXX tab.lo
CXX tunable_slip.lo
CXX angle.lo
CXX angle_harmonic.lo
CXX angle_cosine.lo
CXX angle_cossquare.lo
CXX angledist.lo
CXX dihedral.lo
CXX endangledist.lo
CXX fene.lo
CXX harmonic_dumbbell.lo
CXX harmonic.lo
CXX quartic.lo
CXX overlap.lo
CXX umbrella.lo
CXX bonded_coulomb.lo
CXX subt_lj.lo
CXX object-in-fluid/oif_global_forces.lo
CXX object-in-fluid/oif_local_forces.lo
CXX object-in-fluid/out_direction.lo
CXX hydrogen_bond.lo
CXX twist_stack.lo
CXX debye_hueckel.lo
CXX elc.lo
CXX magnetic_non_p3m_methods.lo
CXX mdlc_correction.lo
CXX maggs.lo
CXX mmm1d.lo
CXX mmm2d.lo
CXX mmm-common.lo
CXX p3m.lo
CXX p3m-common.lo
CXX p3m-dipolar.lo
CXX reaction_field.lo
GEN config-version.cpp
NVCC cuda_init_cuda.lo
NVCC cuda_common_cuda.lo
NVCC electrokinetics_cuda.lo
NVCC fd-electrostatics_cuda.lo
NVCC lbgpu_cuda.lo
NVCC p3m_gpu_cuda.lo
NVCC EspressoSystemInterface_cuda.lo
NVCC integrate_sd_cuda.lo
NVCC integrate_sd_cuda_kernel.lo
NVCC integrate_sd_cuda_debug.lo
NVCC integrate_sd_matrix.lo
NVCC integrate_sd_cuda_device.lo
NVCC actor/Mmm1dgpuForce_cuda.lo
NVCC actor/EwaldGPU_cuda.lo
NVCC actor/HarmonicWell_cuda.lo
NVCC immersed_boundary/ibm_cuda.lo
NVCC actor/DipolarDirectSum_cuda.lo
NVCC actor/HarmonicOrientationWell_cuda.lo
NVCC p3m_gpu_error_cuda.lo
CXX object-in-fluid/affinity.lo
CXX object-in-fluid/membrane_collision.lo
CXX immersed_boundary/ibm_main.lo
CXX immersed_boundary/ibm_triel.lo
CXX immersed_boundary/ibm_volume_conservation.lo
CXX immersed_boundary/ibm_tribend.lo
CXX immersed_boundary/ibm_cuda_interface.lo
CXX actor/ActorList.lo
CXX actor/HarmonicWell.lo
CXX actor/HarmonicOrientationWell.lo
CXX actor/Mmm1dgpuForce.lo
CXX actor/EwaldGPU.lo
CXX actor/DipolarDirectSum.lo
CXX config-version.lo
CXXLD libEspresso.la
make[5]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src/core'>
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src/core'>
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src/core'>
Making all in tcl
make[3]: Entering directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src/tcl'>
CXX bin_tcl.lo
CXX binary_file_tcl.lo
CXX h5mdfile_tcl.lo
CXX blockfile_tcl.lo
CXX rotate_system_tcl.lo
CXX readpdb_tcl.lo
CXX cells_tcl.lo
CXX channels_tcl.lo
CXX collision_tcl.lo
CXX comfixed_tcl.lo
CXX comforce_tcl.lo
CXX config_tcl.lo
CXX constraint_tcl.lo
CXX domain_decomposition_tcl.lo
CXX electrokinetics_tcl.lo
CXX external_potential_tcl.lo
CXX energy_tcl.lo
CXX galilei_tcl.lo
CXX global_tcl.lo
CXX grid_tcl.lo
CXX iccp3m_tcl.lo
CXX imd_tcl.lo
CXX initialize_interpreter.lo
CXX integrate_tcl.lo
CXX interaction_data_tcl.lo
CXX lb-boundaries_tcl.lo
CXX lb_tcl.lo
CXX lees_edwards_tcl.lo
CXX metadynamics_tcl.lo
CXX nemd_tcl.lo
CXX mol_cut_tcl.lo
CXX parser.lo
CXX particle_data_tcl.lo
CXX polymer_tcl.lo
CXX pressure_tcl.lo
CXX random_tcl.lo
CXX reaction_tcl.lo
CXX rattle_tcl.lo
CXX statistics_chain_tcl.lo
CXX statistics_cluster_tcl.lo
CXX statistics_correlation_tcl.lo
CXX statistics_fluid_tcl.lo
CXX statistics_observable_tcl.lo
CXX statistics_wallstuff_tcl.lo
CXX statistics_tcl.lo
CXX thermostat_tcl.lo
CXX topology_tcl.lo
CXX tuning_tcl.lo
CXX uwerr_tcl.lo
CXX virtual_sites_com_tcl.lo
CXX ghmc_tcl.lo
CXX twist_stack_tcl.lo
CXX hydrogen_bond_tcl.lo
CXX minimize_energy_tcl.lo
CXX integrate_sd_tcl.lo
CXX mpiio_tcl.lo
CXX bmhtf-nacl_tcl.lo
CXX buckingham_tcl.lo
CXX cos2_tcl.lo
CXX dpd_tcl.lo
CXX gaussian_tcl.lo
CXX forcecap_tcl.lo
CXX gb_tcl.lo
CXX hat_tcl.lo
CXX hertzian_tcl.lo
CXX lj_tcl.lo
CXX ljangle_tcl.lo
CXX ljcos2_tcl.lo
CXX ljcos_tcl.lo
CXX ljgen_tcl.lo
CXX morse_tcl.lo
CXX soft_sphere_tcl.lo
CXX steppot_tcl.lo
CXX tab_tcl.lo
CXX tunable_slip_tcl.lo
CXX angle_tcl.lo
CXX angle_harmonic_tcl.lo
CXX angle_cosine_tcl.lo
CXX angle_cossquare_tcl.lo
CXX angledist_tcl.lo
CXX dihedral_tcl.lo
CXX endangledist_tcl.lo
CXX fene_tcl.lo
CXX harmonic_dumbbell_tcl.lo
CXX harmonic_tcl.lo
CXX quartic_tcl.lo
CXX bonded_coulomb_tcl.lo
CXX overlap_tcl.lo
CXX subt_lj_tcl.lo
CXX umbrella_tcl.lo
CXX object-in-fluid/oif_global_forces_tcl.lo
CXX object-in-fluid/oif_local_forces_tcl.lo
CXX object-in-fluid/out_direction_tcl.lo
CXX debye_hueckel_tcl.lo
CXX elc_tcl.lo
CXX magnetic_non_p3m_methods_tcl.lo
CXX maggs_tcl.lo
CXX mmm1d_tcl.lo
CXX mmm2d_tcl.lo
CXX p3m-dipolar_tcl.lo
CXX p3m_tcl.lo
CXX reaction_field_tcl.lo
CXX mdlc_correction_tcl.lo
CXX cuda_init_tcl.lo
CXX Espresso_install-scriptsdir.o
CXX Espresso_install-main.o
NVCC cuda_workaround.o
CXX Espresso-scriptsdir.o
CXX Espresso-main.o
CXX object-in-fluid/affinity_tcl.lo
CXX object-in-fluid/membrane_collision_tcl.lo
CXX immersed_boundary/ibm_triel_tcl.lo
CXX immersed_boundary/ibm_volume_conservation_tcl.lo
CXX immersed_boundary/ibm_tribend_tcl.lo
CXX actor/Mmm1dgpu_tcl.lo
CXX actor/Ewaldgpu_tcl.lo
CXX actor/DipolarDirectSum_tcl.lo
CXX actor/HarmonicWell_tcl.lo
CXX actor/HarmonicOrientationWell_tcl.lo
CXXLD libEspressoTcl.la
CXXLD Espresso
CXXLD Espresso.install
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld:
warning: libmpi.so.1, needed by
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../lib64/libboost_mpi-mt.so, may
conflict with libmpi.so.12
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld:
warning: libmpi.so.1, needed by
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../lib64/libboost_mpi-mt.so, may
conflict with libmpi.so.12
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::communicator(int const&,
boost::mpi::comm_create_kind)'
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::operator int() const'
collect2: error: ld returned 1 exit status
Makefile:888: recipe for target 'Espresso' failed
make[3]: *** [Espresso] Error 1
make[3]: *** Waiting for unfinished jobs....
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld:
warning: libmpi.so.1, needed by
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../lib64/libboost_mpi-mt.so, may
conflict with libmpi.so.12
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld:
warning: libmpi.so.1, needed by
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../lib64/libboost_mpi-mt.so, may
conflict with libmpi.so.12
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::communicator(int const&,
boost::mpi::comm_create_kind)'
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::operator int() const'
collect2: error: ld returned 1 exit status
Makefile:892: recipe for target 'Espresso.install' failed
make[3]: *** [Espresso.install] Error 1
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src/tcl'>
Makefile:455: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src'>
Makefile:393: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory
'<http://espressomd.org/jenkins/job/master-nightly-mpich/ws/src'>
Makefile:481: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #336, Jenkins Demon, 2016/06/01
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #337, Jenkins Demon, 2016/06/02
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #338,
Jenkins Demon <=
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #339, Jenkins Demon, 2016/06/06
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #340, Jenkins Demon, 2016/06/13
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #341, Jenkins Demon, 2016/06/13
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #342, Jenkins Demon, 2016/06/14
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #343, Jenkins Demon, 2016/06/14
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #344, Jenkins Demon, 2016/06/15
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #345, Jenkins Demon, 2016/06/16
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #346, Jenkins Demon, 2016/06/21
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #347, Jenkins Demon, 2016/06/21
- [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #348, Jenkins Demon, 2016/06/22