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16/30: gnu: Add r-mice.
From: |
Ricardo Wurmus |
Subject: |
16/30: gnu: Add r-mice. |
Date: |
Tue, 7 Nov 2017 17:32:58 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 10e16fa93d09d72302a2c27d94b2975aa8f86174
Author: Ricardo Wurmus <address@hidden>
Date: Tue Nov 7 15:55:25 2017 +0100
gnu: Add r-mice.
* gnu/packages/cran.scm (r-mice): New variable.
---
gnu/packages/cran.scm | 36 ++++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 609d664..97efca3 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1313,3 +1313,39 @@ Jaro-Winkler). An implementation of soundex is provided
as well. Distances
can be computed between character vectors while taking proper care of encoding
or between integer vectors representing generic sequences.")
(license license:gpl3+)))
+
+(define-public r-mice
+ (package
+ (name "r-mice")
+ (version "2.46.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "mice" version))
+ (sha256
+ (base32
+ "1gjvlk67zvgipfczsca8zqk97vg3sivv82hblsdwp14s7smhjcax"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-lattice" ,r-lattice)
+ ("r-mass" ,r-mass)
+ ("r-nnet" ,r-nnet)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rpart" ,r-rpart)
+ ("r-survival" ,r-survival)))
+ (home-page "https://cran.r-project.org/web/packages/mice/")
+ (synopsis "Multivariate imputation by chained equations")
+ (description
+ "Multiple imputation using @dfn{Fully Conditional Specification} (FCS)
+implemented by the MICE algorithm as described in @url{Van Buuren and
+Groothuis-Oudshoorn (2011), http://doi.org/10.18637/jss.v045.i03}. Each
+variable has its own imputation model. Built-in imputation models are
+provided for continuous data (predictive mean matching, normal), binary
+data (logistic regression), unordered categorical data (polytomous logistic
+regression) and ordered categorical data (proportional odds). MICE can also
+impute continuous two-level data (normal model, pan, second-level variables).
+Passive imputation can be used to maintain consistency between variables.
+Various diagnostic plots are available to inspect the quality of the
+imputations.")
+ ;; Any of these two versions.
+ (license (list license:gpl2 license:gpl3))))
- 04/30: gnu: Add r-annotationfilter., (continued)
- 04/30: gnu: Add r-annotationfilter., Ricardo Wurmus, 2017/11/07
- 01/30: gnu: Add r-genomicfiles., Ricardo Wurmus, 2017/11/07
- 03/30: gnu: Add r-dirichletmultinomial., Ricardo Wurmus, 2017/11/07
- 06/30: gnu: Add r-organismdbi., Ricardo Wurmus, 2017/11/07
- 05/30: gnu: Add r-ensembldb., Ricardo Wurmus, 2017/11/07
- 07/30: gnu: Add r-biovizbase., Ricardo Wurmus, 2017/11/07
- 10/30: gnu: Add r-gqtlbase., Ricardo Wurmus, 2017/11/07
- 11/30: gnu: Add r-snpstats., Ricardo Wurmus, 2017/11/07
- 08/30: gnu: Add r-ggbio., Ricardo Wurmus, 2017/11/07
- 09/30: gnu: Add r-gprofiler., Ricardo Wurmus, 2017/11/07
- 16/30: gnu: Add r-mice.,
Ricardo Wurmus <=
- 26/30: gnu: Add r-rsofia., Ricardo Wurmus, 2017/11/07
- 13/30: gnu: Add r-homo-sapiens., Ricardo Wurmus, 2017/11/07
- 15/30: gnu: Add r-ldblock., Ricardo Wurmus, 2017/11/07
- 12/30: gnu: Add r-org-hs-eg-db., Ricardo Wurmus, 2017/11/07
- 29/30: gnu: r-prabclus: Update description., Ricardo Wurmus, 2017/11/07
- 18/30: gnu: Add r-gqtlstats., Ricardo Wurmus, 2017/11/07
- 19/30: gnu: Add r-gviz., Ricardo Wurmus, 2017/11/07
- 24/30: gnu: Add r-fithic., Ricardo Wurmus, 2017/11/07
- 25/30: gnu: Add r-hitc., Ricardo Wurmus, 2017/11/07
- 23/30: gnu: Add r-sushi., Ricardo Wurmus, 2017/11/07