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09/30: gnu: Add r-gprofiler.
From: |
Ricardo Wurmus |
Subject: |
09/30: gnu: Add r-gprofiler. |
Date: |
Tue, 7 Nov 2017 17:32:56 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 96a392a0b2511bcea94f382b1dd36a189b3f856e
Author: Ricardo Wurmus <address@hidden>
Date: Tue Nov 7 15:35:22 2017 +0100
gnu: Add r-gprofiler.
* gnu/packages/bioinformatics.scm (r-gprofiler): New variable.
---
gnu/packages/bioinformatics.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ba24857..f130d71 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9768,6 +9768,30 @@ views. High-level plots include sequence fragment
length, edge-linked
interval to data view, mismatch pileup, and several splicing summaries.")
(license license:artistic2.0)))
+(define-public r-gprofiler
+ (package
+ (name "r-gprofiler")
+ (version "0.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "gProfileR" version))
+ (sha256
+ (base32
+ "1qix15d0wa9nspdclcawml94mng4qmr2jciv7d24py315wfsvv8p"))))
+ (properties `((upstream-name . "gProfileR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-plyr" ,r-plyr)
+ ("r-rcurl" ,r-rcurl)))
+ (home-page "http://cran.r-project.org/web/packages/gProfileR/")
+ (synopsis "Interface to the g:Profiler toolkit")
+ (description
+ "This package provides tools for functional enrichment analysis,
+gene identifier conversion and mapping homologous genes across related
+organisms via the @code{g:Profiler} toolkit.")
+ (license license:gpl2+)))
+
(define-public r-qvalue
(package
(name "r-qvalue")
- 02/30: gnu: Add r-complexheatmap., (continued)
- 02/30: gnu: Add r-complexheatmap., Ricardo Wurmus, 2017/11/07
- 04/30: gnu: Add r-annotationfilter., Ricardo Wurmus, 2017/11/07
- 01/30: gnu: Add r-genomicfiles., Ricardo Wurmus, 2017/11/07
- 03/30: gnu: Add r-dirichletmultinomial., Ricardo Wurmus, 2017/11/07
- 06/30: gnu: Add r-organismdbi., Ricardo Wurmus, 2017/11/07
- 05/30: gnu: Add r-ensembldb., Ricardo Wurmus, 2017/11/07
- 07/30: gnu: Add r-biovizbase., Ricardo Wurmus, 2017/11/07
- 10/30: gnu: Add r-gqtlbase., Ricardo Wurmus, 2017/11/07
- 11/30: gnu: Add r-snpstats., Ricardo Wurmus, 2017/11/07
- 08/30: gnu: Add r-ggbio., Ricardo Wurmus, 2017/11/07
- 09/30: gnu: Add r-gprofiler.,
Ricardo Wurmus <=
- 16/30: gnu: Add r-mice., Ricardo Wurmus, 2017/11/07
- 26/30: gnu: Add r-rsofia., Ricardo Wurmus, 2017/11/07
- 13/30: gnu: Add r-homo-sapiens., Ricardo Wurmus, 2017/11/07
- 15/30: gnu: Add r-ldblock., Ricardo Wurmus, 2017/11/07
- 12/30: gnu: Add r-org-hs-eg-db., Ricardo Wurmus, 2017/11/07
- 29/30: gnu: r-prabclus: Update description., Ricardo Wurmus, 2017/11/07
- 18/30: gnu: Add r-gqtlstats., Ricardo Wurmus, 2017/11/07
- 19/30: gnu: Add r-gviz., Ricardo Wurmus, 2017/11/07
- 24/30: gnu: Add r-fithic., Ricardo Wurmus, 2017/11/07
- 25/30: gnu: Add r-hitc., Ricardo Wurmus, 2017/11/07