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25/323: gnu: Add r-ashr.
From: |
guix-commits |
Subject: |
25/323: gnu: Add r-ashr. |
Date: |
Mon, 7 Dec 2020 15:12:43 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 309e30de52508d02d83c3a40df61beb50773c4bd
Author: Roel Janssen <roel@gnu.org>
AuthorDate: Wed Nov 18 16:41:54 2020 +0100
gnu: Add r-ashr.
* gnu/packages/cran.scm (r-ashr): New variable.
---
gnu/packages/cran.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 60fac20..25bb9d7 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -585,6 +585,34 @@ interrupts and timeouts. This provides the basis for a
sandboxing
mechanism.")
(license license:expat)))
+(define-public r-ashr
+ (package
+ (name "r-ashr")
+ (version "2.2-47")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "ashr" version))
+ (sha256
+ (base32
+ "1rqb5j30ylaf1h4l66x4jxyn5inrvhc42d90qd5mgkxsq0ghdlr4"))))
+ (properties `((upstream-name . "ashr")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-etrunct" ,r-etrunct)
+ ("r-invgamma" ,r-invgamma)
+ ("r-matrix" ,r-matrix)
+ ("r-mixsqp" ,r-mixsqp)
+ ("r-rcpp" ,r-rcpp)
+ ("r-squarem" ,r-squarem)
+ ("r-truncnorm" ,r-truncnorm)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/stephens999/ashr")
+ (synopsis "Methods for adaptive shrinkage, using empirical bayes")
+ (description "This package implements an empirical Bayes approach for
+large-scale hypothesis testing and false discovery rate estimation.")
+ (license license:gpl3+)))
+
(define-public r-askpass
(package
(name "r-askpass")
- 92/323: gnu: r-gofuncr: Update to 1.10.0., (continued)
- 92/323: gnu: r-gofuncr: Update to 1.10.0., guix-commits, 2020/12/07
- 101/323: gnu: r-somaticsignatures: Update to 2.26.0., guix-commits, 2020/12/07
- 109/323: gnu: Add r-mscoreutils., guix-commits, 2020/12/07
- 123/323: gnu: r-rhisat2: Update to 1.6.0., guix-commits, 2020/12/07
- 11/323: gnu: r-affxparser: Update to 1.62.0., guix-commits, 2020/12/07
- 16/323: gnu: r-geneplotter: Update to 1.68.0., guix-commits, 2020/12/07
- 17/323: gnu: r-oligoclasses: Update to 1.52.0., guix-commits, 2020/12/07
- 21/323: gnu: Add r-apeglm., guix-commits, 2020/12/07
- 22/323: gnu: Add r-invgamma., guix-commits, 2020/12/07
- 24/323: gnu: Add r-mixsqp., guix-commits, 2020/12/07
- 25/323: gnu: Add r-ashr.,
guix-commits <=
- 28/323: gnu: r-multtest: Update to 2.46.0., guix-commits, 2020/12/07
- 33/323: gnu: r-cghcall: Update to 2.52.0., guix-commits, 2020/12/07
- 38/323: gnu: r-ctc: Update to 1.64.0., guix-commits, 2020/12/07
- 46/323: gnu: r-biocneighbors: Update to 1.8.0., guix-commits, 2020/12/07
- 29/323: gnu: r-graph: Update to 1.68.0., guix-commits, 2020/12/07
- 42/323: gnu: r-plgem: Update to 1.62.0., guix-commits, 2020/12/07
- 37/323: gnu: r-riboseqr: Update to 1.24.0., guix-commits, 2020/12/07
- 44/323: gnu: r-dnabarcodes: Update to 1.20.0., guix-commits, 2020/12/07
- 51/323: gnu: r-dnacopy: Update to 1.64.0., guix-commits, 2020/12/07
- 54/323: gnu: r-lpsymphony: Update to 1.18.0., guix-commits, 2020/12/07