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203/323: gnu: Add r-matrixgenerics.
From: |
guix-commits |
Subject: |
203/323: gnu: Add r-matrixgenerics. |
Date: |
Mon, 7 Dec 2020 15:13:47 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 31ce4a53237d1050e47a4456c4c53f10db1d5ea4
Author: Roel Janssen <roel@gnu.org>
AuthorDate: Wed Nov 18 15:51:14 2020 +0100
gnu: Add r-matrixgenerics.
* gnu/packages/bioconductor.scm (r-matrixgenerics): New variable.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7793f92..97dcdfe 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1952,6 +1952,33 @@ for finding the peaks with bi-directional promoters with
summary statistics
enrichedGO (addGeneIDs).")
(license license:gpl2+)))
+(define-public r-matrixgenerics
+ (package
+ (name "r-matrixgenerics")
+ (version "1.2.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MatrixGenerics" version))
+ (sha256
+ (base32
+ "1a3sw79185d6rld3wlrynkzcbp754a7jkracrmvn0ra964ia8zvc"))))
+ (properties
+ `((upstream-name . "MatrixGenerics")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-matrixstats" ,r-matrixstats)))
+ (home-page "https://bioconductor.org/packages/MatrixGenerics")
+ (synopsis "S4 generic summary statistic functions for matrix-like objects")
+ (description
+ "This package provides S4 generic functions modeled after the
+@code{matrixStats} API for alternative matrix implementations. Packages with
+alternative matrix implementation can depend on this package and implement the
+generic functions that are defined here for a useful set of row and column
+summary statistics. Other package developers can import this package and
+handle a different matrix implementations without worrying about
+incompatibilities.")
+ (license license:artistic2.0)))
+
(define-public r-marray
(package
(name "r-marray")
- 171/323: gnu: r-biggr: Update to 1.26.0., (continued)
- 171/323: gnu: r-biggr: Update to 1.26.0., guix-commits, 2020/12/07
- 185/323: gnu: r-biocor: Update to 1.14.0., guix-commits, 2020/12/07
- 182/323: gnu: r-experimenthub: Update to 1.16.0., guix-commits, 2020/12/07
- 189/323: gnu: r-biocworkflowtools: Update to 1.16.0., guix-commits, 2020/12/07
- 190/323: gnu: r-biodist: Update to 1.62.0., guix-commits, 2020/12/07
- 183/323: gnu: r-multiassayexperiment: Update to 1.16.0., guix-commits, 2020/12/07
- 192/323: gnu: r-m3c: Update to 1.12.0., guix-commits, 2020/12/07
- 194/323: gnu: r-fourcseq: Update to 1.24.0., guix-commits, 2020/12/07
- 196/323: gnu: r-rgraphviz: Update to 2.34.0., guix-commits, 2020/12/07
- 195/323: gnu: r-preprocesscore: Update to 1.52.0., guix-commits, 2020/12/07
- 203/323: gnu: Add r-matrixgenerics.,
guix-commits <=
- 201/323: gnu: r-iranges: Update to 2.24.0., guix-commits, 2020/12/07
- 206/323: gnu: r-rhdf5lib: Update to 1.12.0., guix-commits, 2020/12/07
- 211/323: gnu: r-cytoml: Fix r-rhdf5libs linking., guix-commits, 2020/12/07
- 221/323: gnu: r-gostats: Update to 2.56.0., guix-commits, 2020/12/07
- 226/323: gnu: r-biocstyle: Update to 2.18.0., guix-commits, 2020/12/07
- 236/323: gnu: r-biostrings: Update to 2.58.0., guix-commits, 2020/12/07
- 259/323: gnu: r-sva: Update to 3.38.0., guix-commits, 2020/12/07
- 271/323: gnu: r-aroma-light: Update to 3.20.0., guix-commits, 2020/12/07
- 250/323: gnu: r-rhtslib: Update to 1.22.0., guix-commits, 2020/12/07
- 265/323: gnu: r-vsn: Update to 3.58.0., guix-commits, 2020/12/07