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06/08: gnu: r-pasilla: Move from "annotation" to "experiment" section.


From: guix-commits
Subject: 06/08: gnu: r-pasilla: Move from "annotation" to "experiment" section.
Date: Thu, 17 Dec 2020 05:42:36 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit e7fa79fd91f00e66ecbebef4d9f0991c21238ab8
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Dec 17 11:39:51 2020 +0100

    gnu: r-pasilla: Move from "annotation" to "experiment" section.
    
    * gnu/packages/bioconductor.scm (r-pasilla): Move variable.
---
 gnu/packages/bioconductor.scm | 52 +++++++++++++++++++++----------------------
 1 file changed, 26 insertions(+), 26 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index aba7f10..bdedeab 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -843,32 +843,6 @@ performing parallel computations on multicore machines.")
 Disease Ontology.")
     (license license:artistic2.0)))
 
-(define-public r-pasilla
-  (package
-    (name "r-pasilla")
-    (version "1.14.0")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "http://bioconductor.org/packages/release/data/experiment";
-                    "/src/contrib/pasilla_" version ".tar.gz"))
-              (sha256
-               (base32
-                "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-biocstyle" ,r-biocstyle)
-       ("r-dexseq" ,r-dexseq)
-       ("r-knitr" ,r-knitr)
-       ("r-rmarkdown" ,r-rmarkdown)))
-    (home-page "https://www.bioconductor.org/packages/pasilla/";)
-    (synopsis "Data package with per-exon and per-gene read counts")
-    (description "This package provides per-exon and per-gene read counts
-computed for selected genes from RNA-seq data that were presented in the
-article 'Conservation of an RNA regulatory map between Drosophila and mammals'
-by Brooks et al., Genome Research 2011.")
-    (license license:lgpl2.1+)))
-
 (define-public r-pfam-db
   (package
     (name "r-pfam-db")
@@ -1001,6 +975,32 @@ from Illumina 450k methylation arrays.")
 genomes and gene ID formats, largely based on the UCSC table browser.")
     (license license:lgpl2.0+)))
 
+(define-public r-pasilla
+  (package
+    (name "r-pasilla")
+    (version "1.14.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "http://bioconductor.org/packages/release/data/experiment";
+                    "/src/contrib/pasilla_" version ".tar.gz"))
+              (sha256
+               (base32
+                "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biocstyle" ,r-biocstyle)
+       ("r-dexseq" ,r-dexseq)
+       ("r-knitr" ,r-knitr)
+       ("r-rmarkdown" ,r-rmarkdown)))
+    (home-page "https://www.bioconductor.org/packages/pasilla/";)
+    (synopsis "Data package with per-exon and per-gene read counts")
+    (description "This package provides per-exon and per-gene read counts
+computed for selected genes from RNA-seq data that were presented in the
+article 'Conservation of an RNA regulatory map between Drosophila and mammals'
+by Brooks et al., Genome Research 2011.")
+    (license license:lgpl2.1+)))
+
 (define-public r-hsmmsinglecell
   (package
     (name "r-hsmmsinglecell")



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