01/08: gnu: r-coverageview: Move from "experiment" to "package" section.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 17d95689b4d152a53fbb88c49b8693f967cff881
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Dec 17 11:36:26 2020 +0100

    gnu: r-coverageview: Move from "experiment" to "package" section.
    
    * gnu/packages/bioconductor.scm (r-coverageview): Move variable.
---
 gnu/packages/bioconductor.scm | 54 +++++++++++++++++++++----------------------
 1 file changed, 27 insertions(+), 27 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 41cbcf6..c84bdfd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1156,33 +1156,6 @@ mouse, rat and budding yeast.  Mapping data between 
common gene IDs for budding
 yeast are also included.")
     (license license:gpl2+)))
 
-(define-public r-coverageview
-  (package
-    (name "r-coverageview")
-    (version "1.28.0")
-    (source (origin
-              (method url-fetch)
-              (uri (bioconductor-uri "CoverageView" version))
-              (sha256
-               (base32
-                "1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-s4vectors" ,r-s4vectors)
-       ("r-iranges" ,r-iranges)
-       ("r-genomicranges" ,r-genomicranges)
-       ("r-genomicalignments" ,r-genomicalignments)
-       ("r-rtracklayer" ,r-rtracklayer)
-       ("r-rsamtools" ,r-rsamtools)))
-    (home-page "https://bioconductor.org/packages/CoverageView/";)
-    (synopsis "Coverage visualization package for R")
-    (description "This package provides a framework for the visualization of
-genome coverage profiles.  It can be used for ChIP-seq experiments, but it can
-be also used for genome-wide nucleosome positioning experiments or other
-experiment types where it is important to have a framework in order to inspect
-how the coverage distributed across the genome.")
-    (license license:artistic2.0)))
-
 (define-public r-cummerbund
   (package
    (name "r-cummerbund")
@@ -1289,6 +1262,33 @@ of Bioconductor.")
 packages.")
     (license license:artistic2.0)))
 
+(define-public r-coverageview
+  (package
+    (name "r-coverageview")
+    (version "1.28.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "CoverageView" version))
+              (sha256
+               (base32
+                "1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-s4vectors" ,r-s4vectors)
+       ("r-iranges" ,r-iranges)
+       ("r-genomicranges" ,r-genomicranges)
+       ("r-genomicalignments" ,r-genomicalignments)
+       ("r-rtracklayer" ,r-rtracklayer)
+       ("r-rsamtools" ,r-rsamtools)))
+    (home-page "https://bioconductor.org/packages/CoverageView/";)
+    (synopsis "Coverage visualization package for R")
+    (description "This package provides a framework for the visualization of
+genome coverage profiles.  It can be used for ChIP-seq experiments, but it can
+be also used for genome-wide nucleosome positioning experiments or other
+experiment types where it is important to have a framework in order to inspect
+how the coverage distributed across the genome.")
+    (license license:artistic2.0)))
+
 (define-public r-affycomp
   (package
     (name "r-affycomp")