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05/14: gnu: Add r-biomvrcns.


From: guix-commits
Subject: 05/14: gnu: Add r-biomvrcns.
Date: Tue, 7 Sep 2021 08:48:42 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 2794024dc276e6472137c33853bbef35eabac186
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Sep 7 14:37:59 2021 +0200

    gnu: Add r-biomvrcns.
    
    * gnu/packages/bioconductor.scm (r-biomvrcns): New variable.
---
 gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 577727f..b6e7c87 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -14249,6 +14249,34 @@ design.")
 design.")
     (license license:lgpl2.1+)))
 
+(define-public r-biomvrcns
+  (package
+    (name "r-biomvrcns")
+    (version "1.32.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "biomvRCNS" version))
+       (sha256
+        (base32
+         "0wyzj422smr4m9mswzn9inc1sn86pnia7jmd6k28nd2a7fjyrm16"))))
+    (properties `((upstream-name . "biomvRCNS")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-genomicranges" ,r-genomicranges)
+       ("r-gviz" ,r-gviz)
+       ("r-iranges" ,r-iranges)
+       ("r-mvtnorm" ,r-mvtnorm)))
+    (home-page "https://bioconductor.org/packages/biomvRCNS";)
+    (synopsis "Copy number study and segmentation for multivariate biological 
data")
+    (description
+     "In this package, a @dfn{Hidden Semi Markov Model} (HSMM) and one
+homogeneous segmentation model are designed and implemented for segmentation
+genomic data, with the aim of assisting in transcripts detection using high
+throughput technology like RNA-seq or tiling array, and copy number analysis
+using aCGH or sequencing.")
+    (license license:gpl2+)))
+
 (define-public r-tximeta
   (package
     (name "r-tximeta")



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