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bug#25996: Sambamba
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From: |
Pjotr Prins |
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Subject: |
bug#25996: Sambamba |
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Date: |
Tue, 7 Mar 2017 10:46:46 +0000 |
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User-agent: |
Mutt/1.6.2 (2016-07-01) |
Sambamba just got a new release 0.6.6. I have a package here
https://github.com/genenetwork/guix-bioinformatics/blob/master/gn/packages/sambamba.scm
which deals with undeaD and actually enforces dependencies of
externally called samtools and bcftools. 0.6.6 fixes a nasty bug, but
requires a patched version of the ldc compiler (not in GNU Guix):
https://github.com/genenetwork/guix-bioinformatics/blob/master/gn/packages/ldc.scm#L119
https://github.com/genenetwork/guix-bioinformatics/blob/master/ldc-druntime-finiTLSRanges.patch
I suggest we add 0.6.5 to Guix now and update to the newer version when
the dust settles.