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[bug#61220] [PATCH 10/10] gnu: Add r-adacgh2.
From: |
Ricardo Wurmus |
Subject: |
[bug#61220] [PATCH 10/10] gnu: Add r-adacgh2. |
Date: |
Tue, 07 Feb 2023 10:30:23 +0100 |
User-agent: |
mu4e 1.8.13; emacs 28.2 |
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
> * gnu/packages/bioconductor.scm (r-adacgh2): New variable.
[…]
> (define-module (gnu packages bioconductor)
> #:use-module ((guix licenses) #:prefix license:)
> + #:use-module (guix gexp)
[…]
> + (arguments
> + (list
> + #:phases
> + #~(modify-phases %standard-phases
> + (add-before 'configure 'set-PYTHONPATH
> + (lambda _
> + (setenv "PYTHONPATH"
> + (string-append (getcwd) ":"
> + (getenv "GUIX_PYTHONPATH"))))))))
This phase seems unnecessary.
> + ;; This is needed by toMap.py script which is not compatible with python3
> + (inputs (list python2-minimal))
The only reason for Python 2 is the outdated “print”, which is not
called as a function but used as a statement. I patched it instead.
--
Ricardo
- [bug#61220] [patch] gnu: Add r-glad, r-italicsdata, r-pd-mapping50k-xba240, r-italics, r-manor, r-tilingarray, r-snapcgh, r-quantsmooth, r-beadarraysnp and r-adacgh2., address@hidden, 2023/02/01
- [bug#61220] [PATCH 01/10] gnu: Add r-glad., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 03/10] gnu: Add r-pd-mapping50k-xba240., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 07/10] gnu: Add r-snapcgh., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 04/10] gnu: Add r-italics., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 02/10] gnu: Add r-italicsdata., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 09/10] gnu: Add r-beadarraysnp., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 06/10] gnu: Add r-tilingarray., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 10/10] gnu: Add r-adacgh2., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 10/10] gnu: Add r-adacgh2.,
Ricardo Wurmus <=
- [bug#61220] [PATCH 05/10] gnu: Add r-manor., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 08/10] gnu: Add r-quantsmooth., Mădălin Ionel Patrașcu, 2023/02/01
- bug#61220: [PATCH 01/10] gnu: Add r-glad., Ricardo Wurmus, 2023/02/07