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[h5md-user] Molecular viewer for H5MD/Mosaic trajectories

From: Konrad Hinsen
Subject: [h5md-user] Molecular viewer for H5MD/Mosaic trajectories
Date: Thu, 10 Oct 2013 18:12:49 +0200

Hi everyone,

A while ago I mentioned work on an integration of H5MD and Mosaic, and
a simple molecular viewer for that combination that I was working on.
All that is now on Github:

  The viewer:

  The Mosaic library:

  My daily-work branch of PyH5MD, which is what the viewer depends on:

The viewer is currently limited to trajectories for non-periodic
systems, since pyh5md doesn't handle time-dependent box data yet (and
I think there is still no agreement in how it should be handled).

Konrad Hinsen
Centre de Biophysique Moléculaire, CNRS Orléans
Synchrotron Soleil - Division Expériences
Saint Aubin - BP 48
91192 Gif sur Yvette Cedex, France
Tel. +33-1 69 35 97 15
E-Mail: research AT khinsen DOT fastmail DOT net
ORCID: http://orcid.org/0000-0003-0330-9428
Twitter: @khinsen

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