Re: [Gnumed-devel] Can't bootstrap v11.0

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Re: [Gnumed-devel] Can't bootstrap v11.0

From:	Sebastian Hilbert
Subject:	Re: [Gnumed-devel] Can't bootstrap v11.0
Date:	Sat, 15 Aug 2009 08:40:57 +0200
User-agent:	KMail/1.12.0 (Linux/2.6.27.25-0.1-default; KDE/4.3.0; i686; ; )
Am Samstag 15 August 2009 00:03:06 schrieb Rogerio Luz Coelho:
> Hello guys and gals
>
> I am trying to update my production DB
>
> so here is the error:
>
> GNUmed/GNUmed-v11.0/server/bootstrap# sh upgrade-db.sh 10 11
>
> ===========================================================
> Upgrading GNUmed database.
>
> This will *non-destructively* create a new GNUmed database
> of version v11 from an existing v10 database.
> Existing data is transferred and transformed as necessary.
>
> This script usually needs to be run as <root>. Also,
> the database "gnumed_v10" must not be used by
> other users.
>
> The name of the new database will be "gnumed_v11".
> ===========================================================
>
> 1) creating backup of existing database ...
> Note that this may take a substantial amount of time and disk space!
> You may need to type in the password for gm-dbo.
> Senha:
>
> 2) upgrading to new database ...
> Adjusting PYTHONPATH ...
> =======================================
> Bootstrapping GNUmed database system...
> =======================================
> You are about to install the following parts of GNUmed:
> -------------------------------------------------------
> bundle "v10_fixups-pre_v11" in <gnumed_v11> (or overridden) on <>
> bundle "v10-v11-static" in <gnumed_v11> (or overridden) on <>
> bundle "v10-v11-dynamic" in <gnumed_v11> (or overridden) on <>
> bundle "v11-test_data" in <gnumed_v11> (or overridden) on <>
> -------------------------------------------------------
> This will update an existing GNUmed version 10
> database to the version 11 schema. It does not do
> any harm to the data contained within.
>
> The existing database will be cloned first. The copy is
> then modified. The original database remains unchanged.
> Do you really want to install this database setup ?
> Type yes or no: yes
> ==> bootstrapping "v10_fixups-pre_v11" ...
> Cannot bootstrap bundles.
> Please check the log file for details.
> Upgrading "gnumed_v10" to "gnumed_v11" did not finish successfully.
> /GNUmed/GNUmed-v11.0/server/bootstrap#
>
> _________________________________________________________
>
> the log file is:
>
>
>
> 2009-08-14 18:58:52  CRITICAL  gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::__setup_loggi
>ng() #231): -------- start of logging ------------------------------
> 2009-08-14 18:58:52  INFO      gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::__setup_loggi
>ng() #232): log file is
> </home/rogerio/GNUmed/GNUmed-v11.0/server/bootstrap/update_db-v10_v11.log>
> 2009-08-14 18:58:52  INFO      gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::__setup_loggi
>ng() #233): log level is [DEBUG]
> 2009-08-14 18:58:52  INFO      gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::__setup_loggi
>ng() #234): log file encoding is <utf8>
> 2009-08-14 18:58:52  INFO      gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::__setup_loggi
>ng() #235): initial python.str -> python.unicode encoding is
> <ANSI_X3.4-1968> 2009-08-14 18:58:52  INFO      gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::<module>()
> #19): $Revision: 1.20 $
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPsql.py::<module>()
> #18): $Revision: 1.10 $
> 2009-08-14 18:58:52  INFO      gm.db
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLoginInfo.py::<module>
>() #13): $Revision: 1.17 $
> 2009-08-14 18:58:52  INFO      gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::<module>()
> #63): $Revision: 1.47 $
> 2009-08-14 18:58:52  INFO      gm.datetime
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmDateTime.py::<module>(
>) #58): $Revision: 1.29 $
> 2009-08-14 18:58:52  INFO      gm.datetime
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmDateTime.py::<module>(
>) #59): mx.DateTime version: 3.1.0
> 2009-08-14 18:58:52  INFO      gm.db
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py::<module>()
> #29): $Revision: 1.115 $
> 2009-08-14 18:58:52  INFO      gm.db
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py::<module>()
> #41): psycopg2 version: 2.0.7 (dec mx dt ext pq3)
> 2009-08-14 18:58:52  INFO      gm.db
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py::<module>()
> #42): PostgreSQL via DB-API module "<module 'psycopg2' from
> '/usr/lib/python2.5/site-packages/psycopg2/__init__.pyc'>": API level 2.0,
> thread safety 2, parameter style "pyformat"
> 2009-08-14 18:58:52  DEBUG     psycopg2
> (/usr/lib/python2.5/site-packages/psycopg2/pool.py::<module>() #34):
> installed. Logging using Python logging module
> 2009-08-14 18:58:52  INFO      gm.db
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py::<module>()
> #69): assuming default client encoding of [UTF8]
> 2009-08-14 18:58:52  INFO      gm.tools
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmTools.py::<module>()
> #29): $Revision: 1.87 $
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (/home/rogerio/GNUmed/GNUmed-v11.0/server/bootstrap/gmAuditSchemaGenerator.
>py::<module>() #32): $Revision: 1.33 $
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (/home/rogerio/GNUmed/GNUmed-v11.0/server/bootstrap/gmNotificationSchemaGen
>erator.py::<module>() #29): $Revision: 1.36 $
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #125): unmodified startup locale settings (should be [C])
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #127): current locale settings:
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #128): locale.get_locale(): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_NUMERIC): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_MESSAGES): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_MONETARY): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_COLLATE): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_CTYPE): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_TIME): (None, None)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_NUMERIC): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_MESSAGES): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_MONETARY): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_COLLATE): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_CTYPE): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_ALL): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_TIME): C)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #136): locale.getdefaultlocale() - default (user) locale:
> ('pt_BR', 'UTF8') 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #140): encoding sanity check (also check
> "locale.nl_langinfo(CODESET)" below):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #145): sys.getdefaultencoding(): [ascii]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #146): locale.getpreferredencoding(): [ANSI_X3.4-1968]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #147): locale.getlocale()[1]: [None]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #148): sys.getfilesystemencoding(): [UTF-8]
> 2009-08-14 18:58:52  WARNING   gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #155): encoding suggested by locale (ANSI_X3.4-1968) does not
> match encoding currently set in locale (None)
> 2009-08-14 18:58:52  WARNING   gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #156): this might lead to encoding errors
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [ANSI_X3.4-1968]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [ascii]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #164): on Linux you can determine a likely candidate for the
> encoding by running "locale charmap"
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #166): locale related environment variables (${LANG} is typically
> used): 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #169): ${LANGUAGE}=pt_BR:pt:en
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #171): ${LC_ALL} not set
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #171): ${LC_CTYPE} not set
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #169): ${LANG}=pt_BR.UTF-8
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #173): database of locale conventions:
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(mon_decimal_point):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(int_frac_digits): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(p_sep_by_space): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(frac_digits): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(thousands_sep):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(n_sign_posn): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(decimal_point): .
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(int_curr_symbol):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(n_cs_precedes): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(p_sign_posn): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(mon_thousands_sep):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(negative_sign):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(currency_symbol):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(n_sep_by_space): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(mon_grouping): []
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(p_cs_precedes): 127
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(positive_sign):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #177): locale.localeconv(grouping): []
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(D_FMT): %m/%d/%y
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(D_T_FMT): %a %b %e %H:%M:%S %Y
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(YESEXPR): ^[yY]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(ALT_DIGITS):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(T_FMT_AMPM): %I:%M:%S %p
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(RADIXCHAR): .
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(ERA_D_FMT):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(T_FMT): %H:%M:%S
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(NOEXPR): ^[nN]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(CRNCYSTR): -
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(ERA):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(CODESET): ANSI_X3.4-1968
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(THOUSEP):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #192): locale.nl_langinfo(ERA_D_T_FMT):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::activate_loca
>le() #230): activating user-default locale with
> <locale.setlocale(locale.LC_ALL, '')> returns: [pt_BR.UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #125): locale settings after activating user-default locale
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #127): current locale settings:
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #128): locale.get_locale(): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_NUMERIC): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_MESSAGES): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_MONETARY): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_COLLATE): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_CTYPE): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #130): locale.get_locale(LC_TIME): ('pt_BR', 'UTF8')
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_NUMERIC): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_MESSAGES): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_MONETARY): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_COLLATE): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_CTYPE): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_ALL): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #133): (locale.set_locale(LC_TIME): pt_BR.UTF-8)
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #136): locale.getdefaultlocale() - default (user) locale:
> ('pt_BR', 'UTF8') 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #140): encoding sanity check (also check
> "locale.nl_langinfo(CODESET)" below):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #145): sys.getdefaultencoding(): [ascii]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #146): locale.getpreferredencoding(): [UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #147): locale.getlocale()[1]: [UTF8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #148): sys.getfilesystemencoding(): [UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [UTF8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [ascii]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #161): <codecs> module CAN handle encoding [UTF-8]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #164): on Linux you can determine a likely candidate for the
> encoding by running "locale charmap"
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #166): locale related environment variables (${LANG} is typically
> used): 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #169): ${LANGUAGE}=pt_BR:pt:en
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #171): ${LC_ALL} not set
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #171): ${LC_CTYPE} not set
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #169): ${LANG}=pt_BR.UTF-8
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #173): database of locale conventions:
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(mon_decimal_point): ,
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(int_frac_digits): 2
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(p_sep_by_space): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(frac_digits): 2
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(thousands_sep):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(n_sign_posn): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(decimal_point): ,
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(int_curr_symbol): BRL
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(n_cs_precedes): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(p_sign_posn): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(mon_thousands_sep): .
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(negative_sign): -
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(currency_symbol): R$
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(n_sep_by_space): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(mon_grouping): [3, 3, 0]
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(p_cs_precedes): 1
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(positive_sign):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #180): locale.localeconv(grouping): []
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(D_FMT): %d-%m-%Y
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(D_T_FMT): %a %d %b %Y %T %Z
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(YESEXPR): ^[SsyY].*
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(ALT_DIGITS):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(T_FMT_AMPM):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(RADIXCHAR): ,
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(ERA_D_FMT):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(T_FMT): %T
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(NOEXPR): ^[nN].*
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(CRNCYSTR): -R$
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(ERA):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(CODESET): UTF-8
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(THOUSEP):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__log_locale_
>settings() #195): locale.nl_langinfo(ERA_D_T_FMT):
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__split_local
>e_into_levels() #98): splitting canonical locale [pt_BR] into levels
> 2009-08-14 18:58:52  DEBUG     gm.i18n
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmI18N.py::__split_local
>e_into_levels() #107): system locale levels: {'country': 'pt_BR', 'full':
> 'pt_BR', 'language': 'pt'}
> 2009-08-14 18:58:52  INFO      gm.logging
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmLog2.py::set_string_en
>coding() #195): setting python.str -> python.unicode encoding to <UTF8>
> (locale.getlocale)
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::<module>() #1375): startup ($Revision: 1.104
> $)
> 2009-08-14 18:58:52  INFO      gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::add_cli()
> #430): adding command line arguments
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::add_cli()
> #431): raw command line is:
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::add_cli()
> #432): ['./bootstrap_gm_db_system.py',
> '--log-file=./update_db-v10_v11.log', '--conf-file=update_db-v10_v11.conf',
> '--']
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #312):
> option [--quiet] not in group [cli] in source [cli]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [cli::--conf-file] found in source [cli]
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::main() #1318): initial config file:
> update_db-v10_v11.conf
> 2009-08-14 18:58:52  INFO      gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::add_file_sour
>ce() #368): file source "file": update_db-v10_v11.conf (utf8)
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::parse_INI_str
>eam() #197): parsing INI-style data stream [<open file
> 'update_db-v10_v11.conf', mode 'rUb' at 0xa2f5c38>]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #312):
> option [config files] not in group [installation] in source [file]
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::main() #1334): single-shot config file
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::handle_cfg() #1271): config file:
> update_db-v10_v11.conf
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [revision control::file] found in source [file]
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::handle_cfg() #1272): SCM path: $Source:
> /sources/gnumed/gnumed/gnumed/server/bootstrap/update_db-v10_v11.conf,v $
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [revision control::version] found in source [file]
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::handle_cfg() #1273): file version: $Revision:
> 1.21 $
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::become_pg_demon_user() #1231): running as
> user [root]
> 2009-08-14 18:58:52  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::become_pg_demon_user() #1249): switching to
> UNIX user [postgres]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [installation::interactive] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [installation::keep temp files] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [installation::bundles] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [bundle v10_fixups-pre_v11::database alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::server alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [bundle v10-v11-static::database alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::server alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [bundle v10-v11-dynamic::database alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::server alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [bundle v11-test_data::database alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::server alias] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::name] found in source [file]
> 2009-08-14 18:58:52  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [installation::description] found in source [file]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [installation::bundles] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::bootstrap() #1035): bootstrapping bundle
> [v10_fixups-pre_v11]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [bundle v10_fixups-pre_v11::database alias] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__init__() #494): bootstrapping database
> [gnumed_v11]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::override name by] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__init__() #503): environment variable
> [GM_CORE_DB] is not set, using database name from config file
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::name] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__init__() #520): bootstrapping database
> [gnumed_v11] alias "gnumed_v11"
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::server alias] found in source [file]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [database gnumed_v11::template database] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__init__() #291): bootstrapping server [local
> host]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::super user alias] found in source [file]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [user postgres::name] found in source [file]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #312):
> option [password] not in group [user postgres] in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__init__() #276): password not defined,
> assuming connect via IDENT/TRUST
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__connect_superuser_to_srv_template() #328):
> connecting to server template database
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::template database] found in source [file]
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::name] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::__connect_superuser_to_srv_template() #344):
> environment variable [GM_DB_PORT] is not set, using database port from
> config file
> 2009-08-14 18:58:56  DEBUG     gm.cfg
> (/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmCfg2.py::get() #314):
> option [server local host::port] found in source [file]
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::connect() #241): trying DB connection to
> template1 on localhost as postgres
> 2009-08-14 18:58:56  ERROR     gm.bootstrapper
> (./bootstrap_gm_db_system.py::connect() #245): connection failed
> Traceback (most recent call last):
>   File "./bootstrap_gm_db_system.py", line 243, in connect
>     conn = gmPG2.get_connection(dsn=dsn, readonly=False, pooled=False,
> verbose=True)
>   File "/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py", line
> 1251, in get_connection
>     conn = get_raw_connection(dsn=dsn, verbose=verbose, readonly=False)
>   File "/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py", line
> 1187, in get_raw_connection
>     _log.debug('new database connection, backend PID: %s, readonly: %s',
> conn.get_backend_pid(), readonly)
> AttributeError: 'DictConnection' object has no attribute 'get_backend_pid'
> 2009-08-14 18:58:56  ERROR     gm.bootstrapper
> (./bootstrap_gm_db_system.py::bootstrap() #1046): Cannot bootstrap bundle
> [v10_fixups-pre_v11].
> Traceback (most recent call last):
>   File "./bootstrap_gm_db_system.py", line 1044, in bootstrap
>     database(aDB_alias = database_alias)
>   File "./bootstrap_gm_db_system.py", line 539, in __init__
>     db_server(self.server_alias, auth_group = self.name)
>   File "./bootstrap_gm_db_system.py", line 304, in __init__
>     if not self.__bootstrap():
>   File "./bootstrap_gm_db_system.py", line 315, in __bootstrap
>     if not self.__connect_superuser_to_srv_template():
>   File "./bootstrap_gm_db_system.py", line 356, in
> __connect_superuser_to_srv_template
>     self.conn = connect (self.name, self.port, self.template_db,
> self.superuser.name, self.superuser.password)
>   File "./bootstrap_gm_db_system.py", line 243, in connect
>     conn = gmPG2.get_connection(dsn=dsn, readonly=False, pooled=False,
> verbose=True)
>   File "/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py", line
> 1251, in get_connection
>     conn = get_raw_connection(dsn=dsn, verbose=verbose, readonly=False)
>   File "/home/rogerio/GNUmed/GNUmed-v11.0/Gnumed/pycommon/gmPG2.py", line
> 1187, in get_raw_connection
>     _log.debug('new database connection, backend PID: %s, readonly: %s',
> conn.get_backend_pid(), readonly)
> AttributeError: 'DictConnection' object has no attribute 'get_backend_pid'
> 2009-08-14 18:58:56  ERROR     gm.bootstrapper
> (./bootstrap_gm_db_system.py::exit_with_msg() #1202): Cannot bootstrap
> bundles.
> 2009-08-14 18:58:56  INFO      gm.bootstrapper
> (./bootstrap_gm_db_system.py::exit_with_msg() #1203): shutdown
>
>
It is an error in the code not the environement of yours. Did you use the 
latest released tarballs ?

Do you have the option to boostrap all the way instead of upgrading ? Please 
*do not* try that on your production machine !

Will try it here on my machine to find out if I can fix it.

Karsten will have a look at it but he is away for the weekend.
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[Gnumed-devel] Can't bootstrap v11.0, Rogerio Luz Coelho, 2009/08/14
- Re: [Gnumed-devel] Can't bootstrap v11.0, Sebastian Hilbert <=
- Re: [Gnumed-devel] Can't bootstrap v11.0, Karsten Hilbert, 2009/08/18
- Re: [Gnumed-devel] Can't bootstrap v11.0, James Busser, 2009/08/14
  - Re: [Gnumed-devel] Can't bootstrap v11.0, Karsten Hilbert, 2009/08/15
    - Re: [Gnumed-devel] Can't bootstrap v11.0, Jim Busser, 2009/08/15
    - Re: [Gnumed-devel] Can't bootstrap v11.0, Karsten Hilbert, 2009/08/16
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    - Debian psycopg2 was Re: [Gnumed-devel] Can't bootstrap v11.0, Jim Busser, 2009/08/16
    - Re: Debian psycopg2 was Re: [Gnumed-devel] Can't bootstrap v11.0, Karsten Hilbert, 2009/08/18
    - [Gnumed-devel] Re: Debian psycopg2 was Re: Can't bootstrap v11.0, Andreas Tille, 2009/08/18
    - Re: [Gnumed-devel] Re: Debian psycopg2 was Re: Can't bootstrap v11.0, karsten . hilbert, 2009/08/18
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