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09/16: gnu: Add r-experimenthub.
From: |
guix-commits |
Subject: |
09/16: gnu: Add r-experimenthub. |
Date: |
Wed, 18 Dec 2019 09:33:43 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 244270e6ae2d44ab6f06ffa6061660c85d3f357c
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 18 15:25:00 2019 +0100
gnu: Add r-experimenthub.
* gnu/packages/bioconductor.scm (r-experimenthub): New variable.
---
gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++
1 file changed, 32 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index abba62d..70ad6ed 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -7139,3 +7139,35 @@ monograph.")
"This package provides examples and code that make use of the
different graph related packages produced by Bioconductor.")
(license license:artistic2.0)))
+
+(define-public r-experimenthub
+ (package
+ (name "r-experimenthub")
+ (version "1.12.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ExperimentHub" version))
+ (sha256
+ (base32
+ "054w2lkyirbmhgia0rp4nk9zzw3zphz6jxg6fc9zlarp90g64z24"))))
+ (properties `((upstream-name . "ExperimentHub")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationhub" ,r-annotationhub)
+ ("r-biocfilecache" ,r-biocfilecache)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-biocmanager" ,r-biocmanager)
+ ("r-curl" ,r-curl)
+ ("r-rappdirs" ,r-rappdirs)
+ ("r-s4vectors" ,r-s4vectors)))
+ (home-page "https://bioconductor.org/packages/ExperimentHub/")
+ (synopsis "Client to access ExperimentHub resources")
+ (description
+ "This package provides a client for the Bioconductor ExperimentHub web
+resource. ExperimentHub provides a central location where curated data from
+experiments, publications or training courses can be accessed. Each resource
+has associated metadata, tags and date of modification. The client creates
+and manages a local cache of files retrieved enabling quick and reproducible
+access.")
+ (license license:artistic2.0)))
- branch master updated (7e9d6f0 -> 77e2de3), guix-commits, 2019/12/18
- 01/16: gnu: Add r-reactome-db., guix-commits, 2019/12/18
- 02/16: gnu: Add r-curatedtcgadata., guix-commits, 2019/12/18
- 04/16: gnu: Add r-graphite., guix-commits, 2019/12/18
- 05/16: gnu: Add r-reactomepa., guix-commits, 2019/12/18
- 03/16: gnu: Add r-influencer., guix-commits, 2019/12/18
- 06/16: gnu: Add r-ebarrays., guix-commits, 2019/12/18
- 07/16: gnu: Add r-bioccasestudies., guix-commits, 2019/12/18
- 09/16: gnu: Add r-experimenthub.,
guix-commits <=
- 12/16: gnu: Add r-biocor., guix-commits, 2019/12/18
- 08/16: gnu: Add r-biocgraph., guix-commits, 2019/12/18
- 11/16: gnu: Add r-bioconcotk., guix-commits, 2019/12/18
- 13/16: gnu: Add r-biocpkgtools., guix-commits, 2019/12/18
- 14/16: gnu: Add r-biocset., guix-commits, 2019/12/18
- 10/16: gnu: Add r-multiassayexperiment., guix-commits, 2019/12/18
- 15/16: gnu: Add r-biocworkflowtools., guix-commits, 2019/12/18
- 16/16: gnu: Add r-biodist., guix-commits, 2019/12/18