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30/323: gnu: r-chippeakanno: Update to 3.24.0.
From: |
guix-commits |
Subject: |
30/323: gnu: r-chippeakanno: Update to 3.24.0. |
Date: |
Mon, 7 Dec 2020 15:12:45 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 28c08f9290e37cd27664d3f84081953096708cb9
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:48:02 2020 +0100
gnu: r-chippeakanno: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
---
gnu/packages/bioconductor.scm | 14 ++++----------
1 file changed, 4 insertions(+), 10 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index bb63d84..dbd4d06 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1903,36 +1903,31 @@ determining dependencies between variables, code
improvement suggestions.")
(define-public r-chippeakanno
(package
(name "r-chippeakanno")
- (version "3.22.4")
+ (version "3.24.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ChIPpeakAnno" version))
(sha256
(base32
- "0wxgjdikinkqj7jvs2725ak0291q6zhikyf1c93w8cngwvd9i1gq"))))
+ "0qdkwjv8s46d1kmgg2chijv7yzy9sv49kiks18w8x2z89prn15gj"))))
(properties `((upstream-name . "ChIPpeakAnno")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
- ("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
- ("r-biocmanager" ,r-biocmanager)
("r-biomart" ,r-biomart)
("r-biostrings" ,r-biostrings)
- ("r-bsgenome" ,r-bsgenome)
("r-dbi" ,r-dbi)
- ("r-delayedarray" ,r-delayedarray)
("r-ensembldb" ,r-ensembldb)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
- ("r-go-db" ,r-go-db)
+ ("r-ggplot2" ,r-ggplot2)
("r-graph" ,r-graph)
- ("r-idr" ,r-idr)
("r-iranges" ,r-iranges)
- ("r-limma" ,r-limma)
+ ("r-keggrest" ,r-keggrest)
("r-matrixstats" ,r-matrixstats)
("r-multtest" ,r-multtest)
("r-rbgl" ,r-rbgl)
@@ -1940,7 +1935,6 @@ determining dependencies between variables, code
improvement suggestions.")
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
- ("r-seqinr" ,r-seqinr)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-venndiagram" ,r-venndiagram)))
(native-inputs
- 19/323: gnu: r-qvalue: Update to 2.22.0., (continued)
- 19/323: gnu: r-qvalue: Update to 2.22.0., guix-commits, 2020/12/07
- 20/323: gnu: Add r-rcppnumerical., guix-commits, 2020/12/07
- 18/323: gnu: r-oligo: Update to 1.54.0., guix-commits, 2020/12/07
- 23/323: gnu: Add r-etrunct., guix-commits, 2020/12/07
- 26/323: gnu: Add r-greylistchip., guix-commits, 2020/12/07
- 27/323: gnu: r-diffbind: Update to 3.0.7., guix-commits, 2020/12/07
- 39/323: gnu: r-goseq: Update to 1.42.0., guix-commits, 2020/12/07
- 47/323: gnu: r-destiny: Update to 3.4.0., guix-commits, 2020/12/07
- 35/323: gnu: r-bayseq: Update to 2.24.0., guix-commits, 2020/12/07
- 34/323: gnu: r-qdnaseq: Update to 1.26.0., guix-commits, 2020/12/07
- 30/323: gnu: r-chippeakanno: Update to 3.24.0.,
guix-commits <=
- 43/323: gnu: r-inspect: Update to 1.20.0., guix-commits, 2020/12/07
- 31/323: gnu: r-marray: Update to 1.68.0., guix-commits, 2020/12/07
- 36/323: gnu: r-riboprofiling: Update to 1.20.0., guix-commits, 2020/12/07
- 41/323: gnu: r-rots: Update to 1.18.0., guix-commits, 2020/12/07
- 50/323: gnu: r-copynumber: Update to 1.30.0., guix-commits, 2020/12/07
- 61/323: gnu: r-geoquery: Update to 2.58.0., guix-commits, 2020/12/07
- 63/323: gnu: r-siggenes: Update to 1.64.0., guix-commits, 2020/12/07
- 80/323: gnu: r-a4preproc: Update to 1.38.0., guix-commits, 2020/12/07
- 76/323: gnu: r-clusterprofiler: Update to 3.18.0., guix-commits, 2020/12/07
- 90/323: gnu: r-genomicscores: Update to 2.2.0., guix-commits, 2020/12/07