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293/323: gnu: Add r-sparsematrixstats.
From: |
guix-commits |
Subject: |
293/323: gnu: Add r-sparsematrixstats. |
Date: |
Wed, 9 Dec 2020 06:47:55 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 5e719988f2718397440719b76161f4217a6ff223
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Nov 21 10:24:12 2020 +0100
gnu: Add r-sparsematrixstats.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): New variable.
---
gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 78ad278..bec37aa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8917,6 +8917,34 @@ cell-specific biases, assignment of cell cycle phase,
and detection of highly
variable and significantly correlated genes.")
(license license:gpl3)))
+(define-public r-sparsematrixstats
+ (package
+ (name "r-sparsematrixstats")
+ (version "1.2.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "sparseMatrixStats" version))
+ (sha256
+ (base32
+ "0d1idbda1pzhdam9m0i5rn0c6pl7gwv0v3mcrv4wi5760v9qd5qh"))))
+ (properties
+ `((upstream-name . "sparseMatrixStats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-matrix" ,r-matrix)
+ ("r-matrixgenerics" ,r-matrixgenerics)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-rcpp" ,r-rcpp)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/sparseMatrixStats/")
+ (synopsis "Summary statistics for rows and columns of sparse matrices")
+ (description
+ "This package provides high performance functions for row and column
+operations on sparse matrices. Currently, the optimizations are limited to
+data in the column sparse format.")
+ (license license:expat)))
+
(define-public r-delayedmatrixstats
(package
(name "r-delayedmatrixstats")
- 287/323: gnu: r-ldblock: Update to 1.20.0., (continued)
- 287/323: gnu: r-ldblock: Update to 1.20.0., guix-commits, 2020/12/09
- 279/323: gnu: r-complexheatmap: Update to 2.6.2., guix-commits, 2020/12/09
- 265/323: gnu: r-vsn: Update to 3.58.0., guix-commits, 2020/12/09
- 274/323: gnu: r-annotationhub: Update to 2.22.0., guix-commits, 2020/12/09
- 280/323: gnu: r-dirichletmultinomial: Update to 1.32.0., guix-commits, 2020/12/09
- 273/323: gnu: r-interactivedisplaybase: Update to 1.28.0., guix-commits, 2020/12/09
- 291/323: gnu: r-annaffy: Update to 1.62.0., guix-commits, 2020/12/09
- 290/323: gnu: r-sushi: Update to 1.28.0., guix-commits, 2020/12/09
- 271/323: gnu: r-aroma-light: Update to 3.20.0., guix-commits, 2020/12/09
- 289/323: gnu: r-gwascat: Update to 2.22.0., guix-commits, 2020/12/09
- 293/323: gnu: Add r-sparsematrixstats.,
guix-commits <=
- 295/323: gnu: r-interactionset: Update to 1.18.0., guix-commits, 2020/12/09
- 303/323: gnu: Add r-scuttle., guix-commits, 2020/12/09
- 306/323: gnu: r-biocviews: Update to 1.58.1., guix-commits, 2020/12/09
- 305/323: gnu: r-scran: Update to 1.18.0., guix-commits, 2020/12/09
- 310/323: gnu: r-ggcyto: Update to 1.18.0., guix-commits, 2020/12/09
- 311/323: gnu: Add r-catalyst., guix-commits, 2020/12/09
- 316/323: gnu: r-yarn: Update to 1.16.0., guix-commits, 2020/12/09
- 320/323: gnu: r-gqtlstats: Update to 1.21.3., guix-commits, 2020/12/09
- 212/323: gnu: r-ncdfflow: Fix r-rhdf5libs link., guix-commits, 2020/12/09
- 184/323: gnu: r-bioconcotk: Update to 1.10.0., guix-commits, 2020/12/09