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305/323: gnu: r-scran: Update to 1.18.0.
From: |
guix-commits |
Subject: |
305/323: gnu: r-scran: Update to 1.18.0. |
Date: |
Wed, 9 Dec 2020 06:47:58 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit b03c955c6f009e764b05018b399afe1eca8c1a7a
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:57:30 2020 +0100
gnu: r-scran: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.0.
[propagated-inputs]: Add r-bluster, r-scuttle. Remove r-iranges.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
---
gnu/packages/bioconductor.scm | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5b10bfd..c172f15 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8911,14 +8911,14 @@ quality control.")
(define-public r-scran
(package
(name "r-scran")
- (version "1.16.0")
+ (version "1.18.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scran" version))
(sha256
(base32
- "1gm4ys4aq8h1pn45k1rxk384wjyf55izivw8kgxbrflj6j4xvvsv"))))
+ "1zap12rm61z2hg6ykknbif478nr7g468v8mp50bj5hqgi69ywcww"))))
(build-system r-build-system)
(propagated-inputs
`(("r-beachmat" ,r-beachmat)
@@ -8927,17 +8927,17 @@ quality control.")
("r-biocneighbors" ,r-biocneighbors)
("r-biocparallel" ,r-biocparallel)
("r-biocsingular" ,r-biocsingular)
+ ("r-bluster" ,r-bluster)
("r-delayedarray" ,r-delayedarray)
("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-dqrng" ,r-dqrng)
("r-edger" ,r-edger)
("r-igraph" ,r-igraph)
- ("r-iranges" ,r-iranges)
("r-limma" ,r-limma)
("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp)
("r-s4vectors" ,r-s4vectors)
- ("r-scater" ,r-scater)
+ ("r-scuttle" ,r-scuttle)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-statmod" ,r-statmod)
("r-summarizedexperiment" ,r-summarizedexperiment)))
- 280/323: gnu: r-dirichletmultinomial: Update to 1.32.0., (continued)
- 280/323: gnu: r-dirichletmultinomial: Update to 1.32.0., guix-commits, 2020/12/09
- 273/323: gnu: r-interactivedisplaybase: Update to 1.28.0., guix-commits, 2020/12/09
- 291/323: gnu: r-annaffy: Update to 1.62.0., guix-commits, 2020/12/09
- 290/323: gnu: r-sushi: Update to 1.28.0., guix-commits, 2020/12/09
- 271/323: gnu: r-aroma-light: Update to 3.20.0., guix-commits, 2020/12/09
- 289/323: gnu: r-gwascat: Update to 2.22.0., guix-commits, 2020/12/09
- 293/323: gnu: Add r-sparsematrixstats., guix-commits, 2020/12/09
- 295/323: gnu: r-interactionset: Update to 1.18.0., guix-commits, 2020/12/09
- 303/323: gnu: Add r-scuttle., guix-commits, 2020/12/09
- 306/323: gnu: r-biocviews: Update to 1.58.1., guix-commits, 2020/12/09
- 305/323: gnu: r-scran: Update to 1.18.0.,
guix-commits <=
- 310/323: gnu: r-ggcyto: Update to 1.18.0., guix-commits, 2020/12/09
- 311/323: gnu: Add r-catalyst., guix-commits, 2020/12/09
- 316/323: gnu: r-yarn: Update to 1.16.0., guix-commits, 2020/12/09
- 320/323: gnu: r-gqtlstats: Update to 1.21.3., guix-commits, 2020/12/09
- 212/323: gnu: r-ncdfflow: Fix r-rhdf5libs link., guix-commits, 2020/12/09
- 184/323: gnu: r-bioconcotk: Update to 1.10.0., guix-commits, 2020/12/09
- 215/323: gnu: r-deseq2: Update to 1.30.0., guix-commits, 2020/12/09
- 219/323: gnu: r-gseabase: Update to 1.52.0., guix-commits, 2020/12/09
- 232/323: gnu: r-biobase: Update to 2.50.0., guix-commits, 2020/12/09
- 236/323: gnu: r-biostrings: Update to 2.58.0., guix-commits, 2020/12/09