02/13: gnu: Add r-bags.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 628926de8023aebe99155529d3ff9c6cb2408e98
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Mon Nov 6 12:06:38 2023 +0100

    gnu: Add r-bags.
    
    * gnu/packages/bioconductor.scm (r-bags): New variable.
    
    Change-Id: If0c533898a5e05809f23e7e8b52fc3d5fbffc8fb
---
 gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index fb0be48860..19c5e7b50b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4221,6 +4221,27 @@ BaalChIP is able to account for copy number differences 
between the two
 alleles, a known phenotypical feature of cancer samples.")
     (license license:artistic2.0)))
 
+(define-public r-bags
+  (package
+    (name "r-bags")
+    (version "2.42.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "BAGS" version))
+       (sha256
+        (base32 "0356ragpcldr48yycqj91sn3bcqvvfp5spv2z02r8g6hs0dndwdh"))))
+    (properties `((upstream-name . "BAGS")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biobase r-breastcancervdx))
+    (home-page "https://bioconductor.org/packages/BAGS";)
+    (synopsis "Bayesian approach for geneset selection")
+    (description
+     "This R package is providing functions to perform geneset significance
+analysis over simple cross-sectional data between 2 and 5 phenotypes of
+interest.")
+    (license license:artistic2.0)))
+
 (define-public r-basespacer
   (package
     (name "r-basespacer")